X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbinding%2FSequenceType.java;h=1c66a2a97441310f1453098bda9d8de75986832c;hb=8def9b1990b937b039d682d6a7b093dcfea130c2;hp=bf560bb57536d5862d281e955a29521c40dd2346;hpb=99c58ee0ae2a848f982552e53feaf6d5cb9925e5;p=jalview.git

diff --git a/src/jalview/binding/SequenceType.java b/src/jalview/binding/SequenceType.java
index bf560bb..1c66a2a 100755
--- a/src/jalview/binding/SequenceType.java
+++ b/src/jalview/binding/SequenceType.java
@@ -1,29 +1,10 @@
 /*
- * This class was automatically generated with
+ * This class was automatically generated with 
  * <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML
  * Schema.
  * $Id$
  */
 
-/*
-* Jalview - A Sequence Alignment Editor and Viewer
-* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
-*
-* This program is free software; you can redistribute it and/or
-* modify it under the terms of the GNU General Public License
-* as published by the Free Software Foundation; either version 2
-* of the License, or (at your option) any later version.
-*
-* This program is distributed in the hope that it will be useful,
-* but WITHOUT ANY WARRANTY; without even the implied warranty of
-* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-* GNU General Public License for more details.
-*
-* You should have received a copy of the GNU General Public License
-* along with this program; if not, write to the Free Software
-* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
-*/
-
 package jalview.binding;
 
   //---------------------------------/
@@ -42,7 +23,7 @@ import org.xml.sax.ContentHandler;
 
 /**
  * Class SequenceType.
- *
+ * 
  * @version $Revision$ $Date$
  */
 public class SequenceType implements java.io.Serializable {
@@ -58,6 +39,11 @@ public class SequenceType implements java.io.Serializable {
     private java.lang.String _id;
 
     /**
+     * Field _description
+     */
+    private java.lang.String _description;
+
+    /**
      * Field _sequence
      */
     private java.lang.String _sequence;
@@ -82,43 +68,54 @@ public class SequenceType implements java.io.Serializable {
     //-----------/
 
     /**
+     * Returns the value of field 'description'.
+     * 
+     * @return String
+     * @return the value of field 'description'.
+     */
+    public java.lang.String getDescription()
+    {
+        return this._description;
+    } //-- java.lang.String getDescription() 
+
+    /**
      * Returns the value of field 'id'.
-     *
+     * 
      * @return String
      * @return the value of field 'id'.
      */
     public java.lang.String getId()
     {
         return this._id;
-    } //-- java.lang.String getId()
+    } //-- java.lang.String getId() 
 
     /**
      * Returns the value of field 'name'.
-     *
+     * 
      * @return String
      * @return the value of field 'name'.
      */
     public java.lang.String getName()
     {
         return this._name;
-    } //-- java.lang.String getName()
+    } //-- java.lang.String getName() 
 
     /**
      * Returns the value of field 'sequence'.
-     *
+     * 
      * @return String
      * @return the value of field 'sequence'.
      */
     public java.lang.String getSequence()
     {
         return this._sequence;
-    } //-- java.lang.String getSequence()
+    } //-- java.lang.String getSequence() 
 
     /**
      * Method isValid
-     *
-     *
-     *
+     * 
+     * 
+     * 
      * @return boolean
      */
     public boolean isValid()
@@ -130,71 +127,81 @@ public class SequenceType implements java.io.Serializable {
             return false;
         }
         return true;
-    } //-- boolean isValid()
+    } //-- boolean isValid() 
 
     /**
      * Method marshal
-     *
-     *
-     *
+     * 
+     * 
+     * 
      * @param out
      */
     public void marshal(java.io.Writer out)
         throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
     {
-
+        
         Marshaller.marshal(this, out);
-    } //-- void marshal(java.io.Writer)
+    } //-- void marshal(java.io.Writer) 
 
     /**
      * Method marshal
-     *
-     *
-     *
+     * 
+     * 
+     * 
      * @param handler
      */
     public void marshal(org.xml.sax.ContentHandler handler)
         throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
     {
-
+        
         Marshaller.marshal(this, handler);
-    } //-- void marshal(org.xml.sax.ContentHandler)
+    } //-- void marshal(org.xml.sax.ContentHandler) 
+
+    /**
+     * Sets the value of field 'description'.
+     * 
+     * @param description the value of field 'description'.
+     */
+    public void setDescription(java.lang.String description)
+    {
+        this._description = description;
+    } //-- void setDescription(java.lang.String) 
 
     /**
      * Sets the value of field 'id'.
-     *
+     * 
      * @param id the value of field 'id'.
      */
     public void setId(java.lang.String id)
     {
         this._id = id;
-    } //-- void setId(java.lang.String)
+    } //-- void setId(java.lang.String) 
 
     /**
      * Sets the value of field 'name'.
-     *
+     * 
      * @param name the value of field 'name'.
      */
     public void setName(java.lang.String name)
     {
         this._name = name;
-    } //-- void setName(java.lang.String)
+    } //-- void setName(java.lang.String) 
 
     /**
      * Sets the value of field 'sequence'.
-     *
+     * 
      * @param sequence the value of field 'sequence'.
      */
     public void setSequence(java.lang.String sequence)
     {
         this._sequence = sequence;
-    } //-- void setSequence(java.lang.String)
+    } //-- void setSequence(java.lang.String) 
 
     /**
      * Method unmarshal
-     *
-     *
-     *
+     * 
+     * 
+     * 
      * @param reader
      * @return Object
      */
@@ -202,17 +209,17 @@ public class SequenceType implements java.io.Serializable {
         throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
     {
         return (jalview.binding.SequenceType) Unmarshaller.unmarshal(jalview.binding.SequenceType.class, reader);
-    } //-- java.lang.Object unmarshal(java.io.Reader)
+    } //-- java.lang.Object unmarshal(java.io.Reader) 
 
     /**
      * Method validate
-     *
+     * 
      */
     public void validate()
         throws org.exolab.castor.xml.ValidationException
     {
         org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();
         validator.validate(this);
-    } //-- void validate()
+    } //-- void validate() 
 
 }