X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fcommands%2FEditCommand.java;h=388c533fdce34cfeda7fd6be2e2e2a8964e58dd3;hb=f1fbc7674102f63dfe1bd156a2d19f3c658e35d5;hp=98ac2d5d962b6ec616f1b7f0c4e5745b28e86e14;hpb=b44349fe3a5f2d70b74a1b110018a753a1036aca;p=jalview.git

diff --git a/src/jalview/commands/EditCommand.java b/src/jalview/commands/EditCommand.java
index 98ac2d5..388c533 100644
--- a/src/jalview/commands/EditCommand.java
+++ b/src/jalview/commands/EditCommand.java
@@ -555,6 +555,7 @@ public class EditCommand implements CommandI
               command.oldds = new SequenceI[command.seqs.length];
             }
             command.oldds[i] = oldds;
+            // FIXME JAL-2541 JAL-2526 get correct positions if on a gap
             adjustFeatures(
                     command,
                     i,
@@ -1101,8 +1102,8 @@ public class EditCommand implements CommandI
     }
   }
 
-  final static void adjustFeatures(Edit command, int index, int i, int j,
-          boolean insert)
+  final static void adjustFeatures(Edit command, int index, final int i,
+          final int j, boolean insert)
   {
     SequenceI seq = command.seqs[index];
     SequenceI sequence = seq.getDatasetSequence();