X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fcommands%2FSlideSequencesCommand.java;h=e7126ee5282ec4758a1f9600d5dea84e9c7f2bf6;hb=a45774ee31d9f35d4eff46d54d7deab719afb092;hp=9b9c99ec61b2037565c0c3d53b3e73771971c436;hpb=fa93bb578999b13c0364a712ae368ca8841012a1;p=jalview.git

diff --git a/src/jalview/commands/SlideSequencesCommand.java b/src/jalview/commands/SlideSequencesCommand.java
index 9b9c99e..e7126ee 100644
--- a/src/jalview/commands/SlideSequencesCommand.java
+++ b/src/jalview/commands/SlideSequencesCommand.java
@@ -1,23 +1,20 @@
-
 /*
-* Jalview - A Sequence Alignment Editor and Viewer
-* Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
-*
-* This program is free software; you can redistribute it and/or
-* modify it under the terms of the GNU General Public License
-* as published by the Free Software Foundation; either version 2
-* of the License, or (at your option) any later version.
-*
-* This program is distributed in the hope that it will be useful,
-* but WITHOUT ANY WARRANTY; without even the implied warranty of
-* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-* GNU General Public License for more details.
-*
-* You should have received a copy of the GNU General Public License
-* along with this program; if not, write to the Free Software
-* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
-*/
-
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
+ * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * 
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ */
 package jalview.commands;
 
 import jalview.datamodel.*;
@@ -26,11 +23,8 @@ public class SlideSequencesCommand extends EditCommand
 {
   boolean gapsInsertedBegin = false;
 
-  public SlideSequencesCommand(String description,
-                               SequenceI[] seqsLeft,
-                               SequenceI[] seqsRight,
-                               int slideSize,
-                               char gapChar)
+  public SlideSequencesCommand(String description, SequenceI[] seqsLeft,
+          SequenceI[] seqsRight, int slideSize, char gapChar)
   {
     this.description = description;
 
@@ -49,12 +43,12 @@ public class SlideSequencesCommand extends EditCommand
 
     if (!gapsInsertedBegin)
       edits = new Edit[]
-          {  new Edit(DELETE_GAP, seqsLeft, 0, slideSize, gapChar)};
+      { new Edit(DELETE_GAP, seqsLeft, 0, slideSize, gapChar) };
     else
       edits = new Edit[]
-          {  new Edit(INSERT_GAP, seqsRight, 0, slideSize, gapChar)};
+      { new Edit(INSERT_GAP, seqsRight, 0, slideSize, gapChar) };
 
-    performEdit(0,null);
+    performEdit(0, null);
   }
 
   public boolean getGapsInsertedBegin()
@@ -66,7 +60,7 @@ public class SlideSequencesCommand extends EditCommand
   {
     boolean same = false;
 
-    if(command.edits[0].seqs.length==edits[0].seqs.length)
+    if (command.edits[0].seqs.length == edits[0].seqs.length)
     {
       same = true;
       for (int i = 0; i < command.edits[0].seqs.length; i++)
@@ -78,7 +72,7 @@ public class SlideSequencesCommand extends EditCommand
       }
     }
 
-    if(same)
+    if (same)
     {
       Edit[] temp = new Edit[command.edits.length + 1];
       System.arraycopy(command.edits, 0, temp, 0, command.edits.length);
@@ -89,5 +83,3 @@ public class SlideSequencesCommand extends EditCommand
     return same;
   }
 }
-
-