X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FAlignment.java;h=86d2c0e4e2ca02264b95132d26eedef5618ecb8a;hb=cd1ded4a9a6f3478f3b704c9c97fd323ac5dbdd7;hp=8535d84fcd6604f82fcd7de054ad091a7b847b0c;hpb=3479ad05402df852a7758ee89b81ec1fac3301c1;p=jalview.git

diff --git a/src/jalview/datamodel/Alignment.java b/src/jalview/datamodel/Alignment.java
index 8535d84..86d2c0e 100755
--- a/src/jalview/datamodel/Alignment.java
+++ b/src/jalview/datamodel/Alignment.java
@@ -40,7 +40,6 @@ public class Alignment implements AlignmentI
   }
 
   /** Adds a sequence to the alignment.  Recalculates maxLength and size.
-   * Should put the new sequence in a sequence group!!!
    *
    * @param snew
    */
@@ -55,8 +54,7 @@ public class Alignment implements AlignmentI
   }
 
   /** Adds a sequence to the alignment.  Recalculates maxLength and size.
-   * Should put the new sequence in a sequence group!!!
-   *
+    *
    * @param snew
    */
   public void setSequenceAt(int i,SequenceI snew) {
@@ -64,8 +62,6 @@ public class Alignment implements AlignmentI
     deleteSequence(oldseq);
 
     sequences.setElementAt(snew,i);
-
-    ((SequenceGroup)groups.lastElement()).addSequence(snew);
   }
 
   public Vector getGroups() {