X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FAlignmentI.java;h=c7e30a401d445bc2ecf3b5522d212cfd747dda40;hb=0b2e0f52baa343973a6c9b1e652ff584ce418fa0;hp=64dcabb51b6ed1580be9563426aef487f24e672e;hpb=6b2f5111b04caf7ee23fad5312187b1783c26b7d;p=jalview.git diff --git a/src/jalview/datamodel/AlignmentI.java b/src/jalview/datamodel/AlignmentI.java index 64dcabb..c7e30a4 100755 --- a/src/jalview/datamodel/AlignmentI.java +++ b/src/jalview/datamodel/AlignmentI.java @@ -1,23 +1,28 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8) - * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2) + * Copyright (C) 2014 The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * - * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.datamodel; -import java.util.*; +import java.util.Hashtable; +import java.util.List; +import java.util.Map; /** * Data structure to hold and manipulate a multiple sequence alignment @@ -471,7 +476,9 @@ public interface AlignmentI extends AnnotatedCollectionI Map map, boolean up); /** - * validate annotation after an edit and update any alignment state flags accordingly + * validate annotation after an edit and update any alignment state flags + * accordingly + * * @param alignmentAnnotation */ public void validateAnnotation(AlignmentAnnotation alignmentAnnotation);