X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FAlignmentOrder.java;h=6d09145223641865cf3ac0e90c389202eedf3cca;hb=f37c3fd4fe12799de498de5f397252e9f457fee9;hp=ccc9bfa99db94f6d860c75c82bc757382f400b45;hpb=37de9310bec3501cbc6381e0c3dcb282fcaad812;p=jalview.git diff --git a/src/jalview/datamodel/AlignmentOrder.java b/src/jalview/datamodel/AlignmentOrder.java index ccc9bfa..ef46d79 100755 --- a/src/jalview/datamodel/AlignmentOrder.java +++ b/src/jalview/datamodel/AlignmentOrder.java @@ -80,7 +80,7 @@ public class AlignmentOrder */ public AlignmentOrder(AlignmentI orderFrom) { - Order = new ArrayList(); + Order = new ArrayList<>(); for (SequenceI seq : orderFrom.getSequences()) { @@ -96,7 +96,7 @@ public class AlignmentOrder */ public AlignmentOrder(SequenceI[] orderFrom) { - Order = new ArrayList(Arrays.asList(orderFrom)); + Order = new ArrayList<>(Arrays.asList(orderFrom)); } /** @@ -218,7 +218,8 @@ public class AlignmentOrder { if (!identity) { - throw new Error("Weak sequenceI equivalence not yet implemented."); + throw new Error( + "Weak sequenceI equivalence not yet implemented."); } else { @@ -285,7 +286,8 @@ public class AlignmentOrder } if (!identity) { - throw new Error("Weak sequenceI equivalence not yet implemented."); + throw new Error( + "Weak sequenceI equivalence not yet implemented."); } else {