X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FAnnotatedCollectionI.java;h=0f856ee6efbc64b348414a0a53762e20ccb2a0a0;hb=fb27f86492eb06fc39b0578e1c31de8b4c26491a;hp=ff365a99dfb3a7e4c4f52ccc38e4f14b8f9736e7;hpb=b81d4d7d46ea8b1c89df086fb847baab6b69d427;p=jalview.git

diff --git a/src/jalview/datamodel/AnnotatedCollectionI.java b/src/jalview/datamodel/AnnotatedCollectionI.java
index ff365a9..0f856ee 100644
--- a/src/jalview/datamodel/AnnotatedCollectionI.java
+++ b/src/jalview/datamodel/AnnotatedCollectionI.java
@@ -1,14 +1,39 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
+ * Copyright (C) 2014 The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.datamodel;
 
 public interface AnnotatedCollectionI extends SequenceCollectionI
 {
 
   /**
-   * TODO: decide if null is a valid response if there is no annotation on the object
+   * TODO: decide if null is a valid response if there is no annotation on the
+   * object
+   * 
    * @return null
    */
   AlignmentAnnotation[] getAlignmentAnnotation();
 
   Iterable<AlignmentAnnotation> findAnnotation(String calcId);
 
+  /**
+   * context for this annotated collection
+   * @return null or the collection upon which this collection is defined (e.g. alignment, parent group).
+   */
+  AnnotatedCollectionI getContext();
 }