X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FAnnotatedCollectionI.java;h=3f6c515bd9f79975919a618cdc7c12d2ceef81fe;hb=14a3cc9277d30d14bec559a12d9af72bd2955aff;hp=0b4c1178d214a199f1b634557b3980b8f2cdb043;hpb=7ab5d6b0ba5fec1ea4a4239e79c476d841622485;p=jalview.git diff --git a/src/jalview/datamodel/AnnotatedCollectionI.java b/src/jalview/datamodel/AnnotatedCollectionI.java index 0b4c117..3f6c515 100644 --- a/src/jalview/datamodel/AnnotatedCollectionI.java +++ b/src/jalview/datamodel/AnnotatedCollectionI.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2) - * Copyright (C) 2014 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * @@ -31,8 +31,18 @@ public interface AnnotatedCollectionI extends SequenceCollectionI */ AlignmentAnnotation[] getAlignmentAnnotation(); + /** + * Returns a list of annotations matching the given calc id, or an empty list + * if calcId is null + * + * @param calcId + * @return + */ Iterable findAnnotation(String calcId); + Iterable findAnnotations(SequenceI seq, + String calcId, String label); + /** * context for this annotated collection *