X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FAnnotation.java;h=f6919cd36058cbfdacf9503e3aee84ac2bf516de;hb=fbed76ebd126ac6152be48a717c4350e3229b5a5;hp=ae2941786fd442b26ddfe6ee854775e08a5ec4a6;hpb=3d0101179759ef157b088ea135423cd909512d9f;p=jalview.git

diff --git a/src/jalview/datamodel/Annotation.java b/src/jalview/datamodel/Annotation.java
index ae29417..f6919cd 100755
--- a/src/jalview/datamodel/Annotation.java
+++ b/src/jalview/datamodel/Annotation.java
@@ -210,7 +210,10 @@ public class Annotation
     return ((value == 0f)
             && ((description == null) || (description.trim().length() == 0))
             && ((displayCharacter == null)
-                    || (displayCharacter.trim().length() == 0))
+                    || (displayCharacter.trim().length() == 0)
+                    || (displayCharacter.equals(" ."))) // RNA Stockholm blank
+                                                        // displayCharacter can
+                                                        // end up like this
             && (secondaryStructure == '\0' || (secondaryStructure == ' '))
             && colour == null);
   }