X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FBinarySequence.java;h=af10e1d180a37114726ace7c78888867c4f25d5c;hb=7b3241c464d774516c4295a5023f4aef7939298e;hp=423e401d83cf0f49cc26fc6c6179774303ec2b8a;hpb=174230b4233d9ce80f94527768d2cd2f76da11ab;p=jalview.git

diff --git a/src/jalview/datamodel/BinarySequence.java b/src/jalview/datamodel/BinarySequence.java
index 423e401..af10e1d 100755
--- a/src/jalview/datamodel/BinarySequence.java
+++ b/src/jalview/datamodel/BinarySequence.java
@@ -64,9 +64,7 @@ public class BinarySequence extends Sequence
 
             try
             {
-                aanum = ((Integer) ResidueProperties.getAAHash().get(getSequence()
-                                                                         .substring(i,
-                            i + 1))).intValue();
+                aanum = ResidueProperties.aaIndex[getSequence().charAt(i)];
             }
             catch (NullPointerException e)
             {
@@ -101,9 +99,7 @@ public class BinarySequence extends Sequence
 
             try
             {
-                aanum = ((Integer) ResidueProperties.getAAHash().get(getSequence()
-                                                                         .substring(i,
-                            i + 1))).intValue();
+                aanum = ResidueProperties.aaIndex[getSequence().charAt(i)];
             }
             catch (NullPointerException e)
             {