X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FContactListProviderI.java;h=9356026de1f21c9d3890bea4104cff3e5b130c6d;hb=c1f3a352a553ccd40063b14336b27e5a2a7329cf;hp=51f3126701fb5f599478a067b27c2cb069d8a366;hpb=8288438dd58cfc2d1fe18a060afda0d647b85c32;p=jalview.git diff --git a/src/jalview/datamodel/ContactListProviderI.java b/src/jalview/datamodel/ContactListProviderI.java index 51f3126..9356026 100644 --- a/src/jalview/datamodel/ContactListProviderI.java +++ b/src/jalview/datamodel/ContactListProviderI.java @@ -1,3 +1,23 @@ +/* + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors + * + * This file is part of Jalview. + * + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. + */ package jalview.datamodel; import java.awt.Color; @@ -28,18 +48,22 @@ public interface ContactListProviderI */ double getContactAt(int column); - /** - * Return positions in local reference corresponding to cStart and cEnd in matrix data. Positions are base 1 column indices for sequence associated matrices. + * Return positions in local reference corresponding to cStart and cEnd in + * matrix data. Positions are base 1 column indices for sequence associated + * matrices. + * * @param cStart * @param cEnd * @return int[] { start, end (inclusive) for each contiguous segment} */ - default int[] getMappedPositionsFor(int cStart, int cEnd) { - return new int[] { cStart, cEnd}; + default int[] getMappedPositionsFor(int cStart, int cEnd) + { + return new int[] { cStart, cEnd }; } - default Color getColourForGroup() { + default Color getColourForGroup() + { return null; }