X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FDBRefSource.java;h=6a676cfb30d75a907595d857c02daa56922a86a5;hb=16359e92bebc20edafc4958b7b580c8ceedd4d37;hp=6982594f5623fb34e33e6a76458e2b71f218c6e8;hpb=be32c14cd8e48fe0a207cd7030cb9cd46f894678;p=jalview.git diff --git a/src/jalview/datamodel/DBRefSource.java b/src/jalview/datamodel/DBRefSource.java index 6982594..6a676cf 100755 --- a/src/jalview/datamodel/DBRefSource.java +++ b/src/jalview/datamodel/DBRefSource.java @@ -44,7 +44,7 @@ public class DBRefSource * Uniprot Knowledgebase/TrEMBL as served from EMBL protein products. */ public static final String UNIPROTKB = "UniProtKB/TrEMBL".toUpperCase(); - + public static final String EMBLCDSProduct = "EMBLCDSProtein" .toUpperCase(); @@ -81,23 +81,19 @@ public class DBRefSource /** * List of databases whose sequences might have coding regions annotated */ - public static final String[] DNACODINGDBS = - { EMBL, EMBLCDS, GENEDB }; + public static final String[] DNACODINGDBS = { EMBL, EMBLCDS, GENEDB }; - public static final String[] CODINGDBS = - { EMBLCDS, GENEDB }; + public static final String[] CODINGDBS = { EMBLCDS, GENEDB }; - public static final String[] PROTEINDBS = - { UNIPROT, PDB, UNIPROTKB, EMBLCDSProduct }; + public static final String[] PROTEINDBS = { UNIPROT, PDB, UNIPROTKB, + EMBLCDSProduct }; - public static final String[] PROTEINSEQ = - { UNIPROT, UNIPROTKB, EMBLCDSProduct }; + public static final String[] PROTEINSEQ = { UNIPROT, UNIPROTKB, + EMBLCDSProduct }; - public static final String[] PROTEINSTR = - { PDB }; + public static final String[] PROTEINSTR = { PDB }; - public static final String[] DOMAINDBS = - { PFAM, RFAM }; + public static final String[] DOMAINDBS = { PFAM, RFAM }; /** * set of unique DBRefSource property constants. These could be used to