X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FDBRefSource.java;h=fbd11adb54d7020203208e3df5384be3d20c18dd;hb=887c53273a44cff58d64ee094d9e76bb2f90265b;hp=e1f5f4124e2ff0b272d595fc6d360c1e1b569d4e;hpb=a45774ee31d9f35d4eff46d54d7deab719afb092;p=jalview.git diff --git a/src/jalview/datamodel/DBRefSource.java b/src/jalview/datamodel/DBRefSource.java index e1f5f41..fbd11ad 100755 --- a/src/jalview/datamodel/DBRefSource.java +++ b/src/jalview/datamodel/DBRefSource.java @@ -1,6 +1,6 @@ /* * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7) - * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle + * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle * * This file is part of Jalview. * @@ -61,6 +61,11 @@ public class DBRefSource * PFAM ID */ public static String PFAM = "PFAM"; + + /** + * RFAM ID + */ + public static String RFAM = "RFAM"; /** * GeneDB ID @@ -86,7 +91,7 @@ public class DBRefSource { PDB }; public static final String[] DOMAINDBS = - { PFAM }; + { PFAM, RFAM }; /** * set of unique DBRefSource property constants. These could be used to @@ -115,7 +120,7 @@ public class DBRefSource public static final Object DNACODINGSEQDB = "XONCODING"; /** - * DB returns several sequences associated with a protein domain + * DB returns several sequences associated with a protein/nucleotide domain */ public static final Object DOMAINDB = "DOMAIN";