X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FFeatureProperties.java;h=e6f2cb8a3ac625d392bc48b9df47695b0d2c0d9f;hb=1dabf099b7c77fb0a80039f72cef34669df9b2e1;hp=7eadf7b8f6d208a460f61c2521df6177101f6488;hpb=3bf07ba3afb39cea37a1e3eb32da7d498a1fd901;p=jalview.git

diff --git a/src/jalview/datamodel/FeatureProperties.java b/src/jalview/datamodel/FeatureProperties.java
index 7eadf7b..e6f2cb8 100644
--- a/src/jalview/datamodel/FeatureProperties.java
+++ b/src/jalview/datamodel/FeatureProperties.java
@@ -1,24 +1,49 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Development Version 2.4.1)
+ * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+ * 
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 2
+ * of the License, or (at your option) any later version.
+ * 
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
+ */
 package jalview.datamodel;
 
 /**
  * A set of feature property constants used by jalview
+ * 
  * @author JimP
- *
+ * 
  */
 public class FeatureProperties
 {
 
   public static final String EXONPOS = "exon number";
+
   public static final String EXONPRODUCT = "product";
+
   /**
-   * lookup feature type for a particular database to see if its a coding region feature
+   * lookup feature type for a particular database to see if its a coding region
+   * feature
+   * 
    * @param dbrefsource
    * @param string
    * @return
    */
   public static boolean isCodingFeature(String dbrefsource, String type)
   {
-    return ((dbrefsource==null || dbrefsource.equalsIgnoreCase(DBRefSource.EMBL))
-            && type.equalsIgnoreCase("CDS"));
+    return ((dbrefsource == null
+            || dbrefsource.equalsIgnoreCase(DBRefSource.EMBL) || dbrefsource
+            .equalsIgnoreCase(DBRefSource.EMBLCDS)) && type
+            .equalsIgnoreCase("CDS"));
   }
 }