X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FHiddenColumns.java;h=a7e93da69579fe8f372ab56cd54d0d5eddba5979;hb=f53b649151f6393c7353ce51cfd02de348d0bd6e;hp=45dcab28105a29f0f4222a144a95c8ccb22c309c;hpb=405e8b16ccb9b1297e1158ace036f0b1634dac67;p=jalview.git diff --git a/src/jalview/datamodel/HiddenColumns.java b/src/jalview/datamodel/HiddenColumns.java index 45dcab2..a7e93da 100644 --- a/src/jalview/datamodel/HiddenColumns.java +++ b/src/jalview/datamodel/HiddenColumns.java @@ -1008,7 +1008,7 @@ public class HiddenColumns try { LOCK.readLock().lock(); - return new HiddenColsIterator(hiddenColumns); + return new RangeIterator(hiddenColumns); } finally { LOCK.readLock().unlock(); @@ -1029,7 +1029,7 @@ public class HiddenColumns try { LOCK.readLock().lock(); - return new HiddenColsIterator(start, end, hiddenColumns); + return new RangeIterator(start, end, hiddenColumns); } finally { LOCK.readLock().unlock(); @@ -1045,7 +1045,7 @@ public class HiddenColumns * @param end * position to end at (inclusive, visible column position) */ - public Iterator getBoundedStartIterator(int start, int end) + public Iterator getStartRegionIterator(int start, int end) { try { @@ -1062,7 +1062,7 @@ public class HiddenColumns HiddenCursorPosition pos = cursor .findRegionForColumn(absoluteStart - 1, false); - return new BoundedStartRegionIterator(pos, start, end, + return new StartRegionIterator(pos, start, end, hiddenColumns); } finally { @@ -1084,7 +1084,8 @@ public class HiddenColumns try { LOCK.readLock().lock(); - return new VisibleColsIterator(start, end, hiddenColumns); + return new RangeElementsIterator( + new VisibleContigsIterator(start, end + 1, hiddenColumns)); } finally { LOCK.readLock().unlock();