X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FHiddenSequences.java;h=e2ef31886d5542835935e42f1d09c21a4fab0b25;hb=a1f00ef5e877d63fe0463710baecfc458dc0907c;hp=32443d820f3aaccd57b076f5d5d78043b5a1d6f7;hpb=4a9a2fc8a1b1a66b21e66429083f27a6fc8541b9;p=jalview.git

diff --git a/src/jalview/datamodel/HiddenSequences.java b/src/jalview/datamodel/HiddenSequences.java
index 32443d8..e2ef318 100755
--- a/src/jalview/datamodel/HiddenSequences.java
+++ b/src/jalview/datamodel/HiddenSequences.java
@@ -159,7 +159,7 @@ public class HiddenSequences
 
     if (alignmentIndex < 0 || hiddenSequences[alignmentIndex] != null)
     {
-      System.out.println("ERROR!!!!!!!!!!!");
+      jalview.bin.Console.outPrintln("ERROR!!!!!!!!!!!");
       return;
     }
 
@@ -222,8 +222,8 @@ public class HiddenSequences
       end = hiddenSequences.length - 1;
     }
 
-    List<SequenceI> asequences;
-    synchronized (asequences = alignment.getSequences())
+    List<SequenceI> asequences = alignment.getSequences();
+    synchronized (asequences)
     {
       for (int index = end; index > start; index--)
       {
@@ -239,8 +239,8 @@ public class HiddenSequences
           }
           else
           {
-            System.out.println(seq.getName()
-                    + " has been deleted whilst hidden");
+            jalview.bin.Console.outPrintln(
+                    seq.getName() + " has been deleted whilst hidden");
           }
         }
       }