X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FMapping.java;h=1272538fb41432cf9599a93b22a09f9b81f9e7fd;hb=4d7f98a6dd54d9863ba449ec79dcd95d25ed863d;hp=d7b7eb98ff38fa565070834efbbaec448b8d2075;hpb=d66775feacb4a7cc43c5296e8ef33811e5e75e79;p=jalview.git

diff --git a/src/jalview/datamodel/Mapping.java b/src/jalview/datamodel/Mapping.java
index d7b7eb9..1272538 100644
--- a/src/jalview/datamodel/Mapping.java
+++ b/src/jalview/datamodel/Mapping.java
@@ -20,12 +20,12 @@
  */
 package jalview.datamodel;
 
+import jalview.util.MapList;
+
 import java.util.Iterator;
 import java.util.NoSuchElementException;
 import java.util.Vector;
 
-import jalview.util.MapList;
-
 public class Mapping
 {
   /**
@@ -163,7 +163,8 @@ public class Mapping
     {
       // TODO should ideally handle toRatio other than 1 as well...
       // i.e. code like getNextCodon()
-      if (toPosition <= currentToRange[1]) {
+      if (toPosition <= currentToRange[1])
+      {
         char pep = Mapping.this.to.getSequence()[toPosition - 1];
         toPosition++;
         return String.valueOf(pep);
@@ -466,8 +467,7 @@ public class Mapping
       int[] mp = map.shiftFrom(pos);
       if (mp != null)
       {
-        return new int[]
-        { mp[0], mp[0] + mp[2] * (map.getToRatio() - 1) };
+        return new int[] { mp[0], mp[0] + mp[2] * (map.getToRatio() - 1) };
       }
     }
     return null;
@@ -528,8 +528,7 @@ public class Mapping
       }
     }
     // give up and just return the feature.
-    return new SequenceFeature[]
-    { f };
+    return new SequenceFeature[] { f };
   }
 
   /**
@@ -565,8 +564,7 @@ public class Mapping
       }
       return map.locateInFrom(from, to);
     }
-    return new int[]
-    { from, to };
+    return new int[] { from, to };
   }
 
   /**
@@ -602,8 +600,7 @@ public class Mapping
       }
       return map.locateInTo(from, to);
     }
-    return new int[]
-    { from, to };
+    return new int[] { from, to };
   }
 
   /**
@@ -631,13 +628,11 @@ public class Mapping
         {
           for (int m = 0; m < mpr.length; m += 2)
           {
-            toRange.addElement(new int[]
-            { mpr[m], mpr[m + 1] });
+            toRange.addElement(new int[] { mpr[m], mpr[m + 1] });
             int[] xpos = locateRange(mpr[m], mpr[m + 1]);
             for (int x = 0; x < xpos.length; x += 2)
             {
-              fromRange.addElement(new int[]
-              { xpos[x], xpos[x + 1] });
+              fromRange.addElement(new int[] { xpos[x], xpos[x + 1] });
             }
           }
         }