X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FMapping.java;h=4d90e3e0b6c042533ef42f020ccbb232c9b7094c;hb=481ae9f847bc4f1437b2cfbf6c61ed040bc61892;hp=328b96a05ae88ba1e8ec40bc6e974e32c2a16f0c;hpb=be762d8d9c71a7aa3121e845c45911c7192b7827;p=jalview.git

diff --git a/src/jalview/datamodel/Mapping.java b/src/jalview/datamodel/Mapping.java
index 328b96a..4d90e3e 100644
--- a/src/jalview/datamodel/Mapping.java
+++ b/src/jalview/datamodel/Mapping.java
@@ -20,13 +20,13 @@
  */
 package jalview.datamodel;
 
-import jalview.util.Comparison;
-import jalview.util.MapList;
-
 import java.util.Iterator;
 import java.util.NoSuchElementException;
 import java.util.Vector;
 
+import jalview.util.Comparison;
+import jalview.util.MapList;
+
 public class Mapping
 {
   /**
@@ -433,23 +433,6 @@ public class Mapping
   }
 
   /**
-   * gets boundary in direction of mapping
-   * 
-   * @param position
-   *          in mapped reference frame
-   * @return int{start, end} positions in associated sequence (in direction of
-   *         mapped word)
-   */
-  public int[] getWord(int mpos)
-  {
-    if (map != null)
-    {
-      return map.getToWord(mpos);
-    }
-    return null;
-  }
-
-  /**
    * width of mapped unit in associated sequence
    * 
    */
@@ -693,19 +676,6 @@ public class Mapping
     to = tto;
   }
 
-  /*
-   * (non-Javadoc)
-   * 
-   * @see java.lang.Object#finalize()
-   */
-  @Override
-  protected void finalize() throws Throwable
-  {
-    map = null;
-    to = null;
-    super.finalize();
-  }
-
   /**
    * Returns an iterator which can serve up the aligned codon column positions
    * and their corresponding peptide products