X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FResidueCount.java;h=efab97cabcf0267fcc24f5d3e746217e124ce118;hb=b26fefd329b60deb2025aa28cdbaae30bfb58382;hp=b21dd77e5d6a3b5c13099222406853fc6622ec5e;hpb=a718393f87a8396c8e7733f579d955126c707f4e;p=jalview.git

diff --git a/src/jalview/datamodel/ResidueCount.java b/src/jalview/datamodel/ResidueCount.java
index b21dd77..efab97c 100644
--- a/src/jalview/datamodel/ResidueCount.java
+++ b/src/jalview/datamodel/ResidueCount.java
@@ -212,7 +212,12 @@ public class ResidueCount
         counts[offset] = (short) ++newValue;
       }
     }
-    maxCount = Math.max(maxCount, newValue);
+
+    if (offset!=GAP_COUNT)
+    {
+      // update modal residue count
+      maxCount = Math.max(maxCount, newValue);
+    }
     return newValue;
   }
 
@@ -301,15 +306,7 @@ public class ResidueCount
    */
   public int addGap()
   {
-    int newValue;
-    if (useIntCounts)
-    {
-      newValue = ++intCounts[GAP_COUNT];
-    }
-    else
-    {
-      newValue = ++counts[GAP_COUNT];
-    }
+    int newValue = increment(GAP_COUNT);
     return newValue;
   }