X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSearchResults.java;h=240052464ef1842fa1686be892d3af4cbe89f8b7;hb=1dabf099b7c77fb0a80039f72cef34669df9b2e1;hp=e62c1507f9e4fdb1af855acb701ab6e28bc22ab5;hpb=506d60f0e188723ddc91c26824b41ac7034df3fe;p=jalview.git

diff --git a/src/jalview/datamodel/SearchResults.java b/src/jalview/datamodel/SearchResults.java
index e62c150..2400524 100755
--- a/src/jalview/datamodel/SearchResults.java
+++ b/src/jalview/datamodel/SearchResults.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)
- * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Development Version 2.4.1)
+ * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
  * 
  * This program is free software; you can redistribute it and/or
  * modify it under the terms of the GNU General Public License
@@ -57,7 +57,29 @@ public class SearchResults
 
     matches = tmp;
   }
-
+  /**
+   * Quickly check if the given sequence is referred to in the search results
+   * @param sequence (specific alignment sequence or a dataset sequence)
+   * @return true if the results involve sequence
+   */
+  public boolean involvesSequence(SequenceI sequence)
+  {
+    if (matches==null || matches.length==0)
+    {
+      return false;
+    }
+    SequenceI ds = sequence.getDatasetSequence();
+    for (int m=0; m<matches.length; m++)
+    {
+      if (matches[m].sequence!=null &&
+              (matches[m].sequence==sequence 
+              || matches[m].sequence==ds))
+      {
+        return true;
+      }
+    }
+    return false;
+  }
   /**
    * This Method returns the search matches which lie between the start and end
    * points of the sequence in question. It is optimised for returning objects