X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSearchResults.java;h=8ed47dcda0e432a13bc654645036518532011bf0;hb=c55e1fa5d2782cc46e515c11a91cf502f37386ab;hp=8d98fc4590e9939af00a5b75e72cd75f166aa524;hpb=f89f3ea0068a1be259c1705277eecf1614484616;p=jalview.git diff --git a/src/jalview/datamodel/SearchResults.java b/src/jalview/datamodel/SearchResults.java index 8d98fc4..8ed47dc 100755 --- a/src/jalview/datamodel/SearchResults.java +++ b/src/jalview/datamodel/SearchResults.java @@ -34,7 +34,7 @@ import java.util.List; public class SearchResults implements SearchResultsI { - private List matches = new ArrayList(); + private List matches = new ArrayList<>(); /** * One match consists of a sequence reference, start and end positions. @@ -42,17 +42,17 @@ public class SearchResults implements SearchResultsI */ public class Match implements SearchResultMatchI { - SequenceI sequence; + final SequenceI sequence; /** * Start position of match in sequence (base 1) */ - int start; + final int start; /** * End position (inclusive) (base 1) */ - int end; + final int end; /** * create a Match on a range of sequence. Match always holds region in @@ -133,11 +133,6 @@ public class SearchResults implements SearchResultsI return sb.toString(); } - public void setSequence(SequenceI seq) - { - this.sequence = seq; - } - /** * Hashcode is the hashcode of the matched sequence plus a hash of start and * end positions. Match objects that pass the test for equals are guaranteed @@ -358,4 +353,10 @@ public class SearchResults implements SearchResultsI SearchResultsI sr = (SearchResultsI) obj; return matches.equals(sr.getResults()); } + + @Override + public void addSearchResults(SearchResultsI toAdd) + { + matches.addAll(toAdd.getResults()); + } }