X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSecondaryStructureAnnotation.java;h=476eb19f9cf7667b8234cdb2350a7d36cc0ee6e6;hb=37de9310bec3501cbc6381e0c3dcb282fcaad812;hp=5c3eae92fe8bc695ba6ae2bd6b10d3ab1d769129;hpb=a7f8fa9c06d82efbbdbc6a0bf1054bb21610b353;p=jalview.git

diff --git a/src/jalview/datamodel/SecondaryStructureAnnotation.java b/src/jalview/datamodel/SecondaryStructureAnnotation.java
index 5c3eae9..476eb19 100644
--- a/src/jalview/datamodel/SecondaryStructureAnnotation.java
+++ b/src/jalview/datamodel/SecondaryStructureAnnotation.java
@@ -1,31 +1,52 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.datamodel;
 
 import fr.orsay.lri.varna.models.rna.RNA;
 
 public class SecondaryStructureAnnotation extends AlignmentAnnotation
 {
-	
 
-	private static RNA _rna = null;
-	  public SecondaryStructureAnnotation (RNA rna) 
-	  {
-		 super("Secondary Structure", "Un truc trop cool",getAnnotation(rna));
-		 
-	    
-	    _rna = rna;
-	  }
-	
-	  public RNA getRNA()
-	 {
-		  return _rna;
-	 }
-	  public static Annotation[] getAnnotation(RNA rna) 
-	  {
-		  Annotation[] ann =  new Annotation[rna.getSize()];
-			 for(int i=0;i<ann.length;i++)
-			 {	
-				 ann[i] = new Annotation(_rna.getStructDBN(true), "", ' ', 0f);; 
-			 }
-		  return ann;
-	  }
+  private static RNA _rna = null;
+
+  public SecondaryStructureAnnotation(RNA rna)
+  {
+    super("Secondary Structure", "Un truc trop cool", getAnnotation(rna));
+
+    _rna = rna;
+  }
+
+  public RNA getRNA()
+  {
+    return _rna;
+  }
+
+  public static Annotation[] getAnnotation(RNA rna)
+  {
+    Annotation[] ann = new Annotation[rna.getSize()];
+    for (int i = 0; i < ann.length; i++)
+    {
+      ann[i] = new Annotation(_rna.getStructDBN(true), "", ' ', 0f);
+      ;
+    }
+    return ann;
+  }
 }