X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSecondaryStructureAnnotation.java;h=476eb19f9cf7667b8234cdb2350a7d36cc0ee6e6;hb=d1e20f6a5654ea6baf378afa3277b4e751c69a96;hp=8c249ccb454e41a27aef45057b490c08aecb6da9;hpb=47168f025aefdaa044802bd5f8f510ffe43a4808;p=jalview.git diff --git a/src/jalview/datamodel/SecondaryStructureAnnotation.java b/src/jalview/datamodel/SecondaryStructureAnnotation.java index 8c249cc..476eb19 100644 --- a/src/jalview/datamodel/SecondaryStructureAnnotation.java +++ b/src/jalview/datamodel/SecondaryStructureAnnotation.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2) - * Copyright (C) 2014 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * @@ -24,28 +24,29 @@ import fr.orsay.lri.varna.models.rna.RNA; public class SecondaryStructureAnnotation extends AlignmentAnnotation { - - private static RNA _rna = null; - public SecondaryStructureAnnotation (RNA rna) - { - super("Secondary Structure", "Un truc trop cool",getAnnotation(rna)); - - - _rna = rna; - } - - public RNA getRNA() - { - return _rna; - } - public static Annotation[] getAnnotation(RNA rna) - { - Annotation[] ann = new Annotation[rna.getSize()]; - for(int i=0;i