X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSeqCigar.java;h=07a62c9888b3e99ec51b713b91fdfd9e2429fbf8;hb=49ab19e8189569edf0bc1f4ba8dac14e67f4ca36;hp=34697b366ad1fed635e93a351359f1ed9af3238b;hpb=26816cdcb7617e74fad006d2c675efb298e0d9b1;p=jalview.git

diff --git a/src/jalview/datamodel/SeqCigar.java b/src/jalview/datamodel/SeqCigar.java
index 34697b3..07a62c9 100644
--- a/src/jalview/datamodel/SeqCigar.java
+++ b/src/jalview/datamodel/SeqCigar.java
@@ -22,6 +22,7 @@ package jalview.datamodel;
 
 import jalview.analysis.AlignSeq;
 import jalview.analysis.SeqsetUtils;
+import jalview.analysis.SeqsetUtils.SequenceInfo;
 import jalview.util.MessageManager;
 import jalview.util.ShiftList;
 
@@ -37,7 +38,7 @@ public class SeqCigar extends CigarSimple
 
   private SequenceI refseq = null;
 
-  private Hashtable seqProps;
+  private SequenceInfo seqProps;
 
   /**
    * Reference dataset sequence for the cigar string
@@ -587,7 +588,6 @@ public class SeqCigar extends CigarSimple
                       + (bounds[2] == 0 ? -1 : bounds[2]));
       seqs[i].setDatasetSequence(ref);
       seqs[i].setDescription(ref.getDescription());
-      SeqsetUtils.SeqCharacterUnhash(seqs[i],alseqs[i].seqProps,true,true);
     }
     if (segments != null)
     {