X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSeqDistanceContactMatrix.java;h=7dd9778b2ca2aeb6cf93fc71b8b8c22202a11fba;hb=4a59f639cf5769d9ec66142ebecfa4961c5d3b04;hp=721e5cafd36efb0c5d79a8cd2b52d87072354ae8;hpb=4a560601f94b229cca59f64561bf87f146cc896b;p=jalview.git diff --git a/src/jalview/datamodel/SeqDistanceContactMatrix.java b/src/jalview/datamodel/SeqDistanceContactMatrix.java index 721e5ca..7dd9778 100644 --- a/src/jalview/datamodel/SeqDistanceContactMatrix.java +++ b/src/jalview/datamodel/SeqDistanceContactMatrix.java @@ -14,6 +14,19 @@ public class SeqDistanceContactMatrix implements ContactMatrixI { this.width = width; } + + @Override + public float getMin() + { + return 0f; + } + + @Override + public float getMax() + { + return width; + } + @Override public ContactListI getContactList(final int column) { @@ -48,6 +61,12 @@ public class SeqDistanceContactMatrix implements ContactMatrixI } @Override + public int getPosition() + { + return p; + } + + @Override public double getContactAt(int column) { return Math.abs(column - p); @@ -55,4 +74,29 @@ public class SeqDistanceContactMatrix implements ContactMatrixI }); } + @Override + public boolean hasReferenceSeq() + { + // TODO Auto-generated method stub + return false; + } + + @Override + public SequenceI getReferenceSeq() + { + // TODO Auto-generated method stub + return null; + } + + @Override + public String getAnnotDescr() + { + return "Sequence distance matrix"; + } + + @Override + public String getAnnotLabel() + { + return "Sequence Distance"; + } }