X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSequence.java;fp=src%2Fjalview%2Fdatamodel%2FSequence.java;h=42303660de8a07b5f50bd7454509edaf43460a2d;hb=bea1d9b563d2fea018de3dbde9112dd59149126e;hp=509a287b0d4e00df8abb78216f312e00a0286c0a;hpb=49ab19e8189569edf0bc1f4ba8dac14e67f4ca36;p=jalview.git

diff --git a/src/jalview/datamodel/Sequence.java b/src/jalview/datamodel/Sequence.java
index 509a287..4230366 100755
--- a/src/jalview/datamodel/Sequence.java
+++ b/src/jalview/datamodel/Sequence.java
@@ -258,6 +258,21 @@ public class Sequence extends ASequence implements SequenceI
   }
 
   /**
+   * Create a new sequence object from a characters array using default values
+   * of 1 and -1 for start and end. The array used to create the sequence is
+   * copied and is not stored internally.
+   * 
+   * @param name
+   *          sequence name
+   * @param sequence
+   *          list of residues
+   */
+  public Sequence(String name, char[] sequence)
+  {
+    this(name, Arrays.copyOf(sequence, sequence.length), 1, -1);
+  }
+
+  /**
    * Creates a new Sequence object with new AlignmentAnnotations but inherits
    * any existing dataset sequence reference. If non exists, everything is
    * copied.