X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSequenceCollectionI.java;h=aca79c83f37394812b583491465308e931ac0132;hb=2ba5acf66eb72f7df5258aecbb524620f353c373;hp=0b40b9221630133e31e6a518564a325c9921925f;hpb=25aaaa87042b3f507ad4348120df7dd073182759;p=jalview.git

diff --git a/src/jalview/datamodel/SequenceCollectionI.java b/src/jalview/datamodel/SequenceCollectionI.java
index 0b40b92..aca79c8 100644
--- a/src/jalview/datamodel/SequenceCollectionI.java
+++ b/src/jalview/datamodel/SequenceCollectionI.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -29,20 +29,26 @@ public interface SequenceCollectionI
 
   List<SequenceI> getSequences(
           Map<SequenceI, SequenceCollectionI> hiddenReps);
+
   int getWidth();
+
   /**
    * 
    * @return true if getSeqrep doesn't return null
    */
   boolean hasSeqrep();
+
   /**
    * get the reference or representative sequence within this collection
+   * 
    * @return null or the current reference sequence
    */
   SequenceI getSeqrep();
+
   /**
-   * set the reference or representative sequence for this collection. 
-   * Reference is assumed to be present within the collection.
+   * set the reference or representative sequence for this collection. Reference
+   * is assumed to be present within the collection.
+   * 
    * @return
    */
   void setSeqrep(SequenceI refseq);