X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSequenceFeature.java;h=bbf1b4515595fdc5837e1384a47cb046259237e1;hb=08c7bee16c16563cc7cec7ea4d336b3e0c4c937a;hp=01574e1e7d650f8cc83fa18cdd36ebe6c3476245;hpb=de96de2488774840f2f6298d757369f9e43acaee;p=jalview.git diff --git a/src/jalview/datamodel/SequenceFeature.java b/src/jalview/datamodel/SequenceFeature.java index 01574e1..bbf1b45 100755 --- a/src/jalview/datamodel/SequenceFeature.java +++ b/src/jalview/datamodel/SequenceFeature.java @@ -612,10 +612,9 @@ public class SequenceFeature implements FeatureLocationI String consequence = ""; if (mf != null) { - int[] beginRange = mf.getMappedPositions(begin, begin); - int[] endRange = mf.getMappedPositions(end, end); - int from = beginRange[0]; - int to = endRange[endRange.length - 1]; + int[] localRange = mf.getMappedPositions(begin, end); + int from = localRange[0]; + int to = localRange[localRange.length - 1]; String s = mf.isFromCds() ? "Peptide Location" : "Coding location"; sb.append(String.format(ROW_DATA, s, seqName, from == to ? from : from + (isContactFeature() ? ":" : "-") + to)); @@ -639,7 +638,7 @@ public class SequenceFeature implements FeatureLocationI if (!consequence.isEmpty()) { sb.append(String.format(ROW_DATA, "Consequence", - "Imputed by Jalview", consequence)); + "Translated by Jalview", consequence)); } if (otherDetails != null)