X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSequenceGroup.java;h=17348c2cf08763271f3bf1fc3300e8293f209fbb;hb=341e759bcdf94d50e58217f55a87f25a44eeef54;hp=f8fd3ee0fc235634f562b3d436c5c1de52ef8aac;hpb=fe6b3fb39308b5c045849db2be75ba07824be776;p=jalview.git diff --git a/src/jalview/datamodel/SequenceGroup.java b/src/jalview/datamodel/SequenceGroup.java index f8fd3ee..17348c2 100755 --- a/src/jalview/datamodel/SequenceGroup.java +++ b/src/jalview/datamodel/SequenceGroup.java @@ -1308,28 +1308,4 @@ public class SequenceGroup implements AnnotatedCollectionI { return context; } - - @Override - public Iterable findAnnotation( - SequenceI datasequence, String calcId, String label) - { - List result = new ArrayList(); - for (AlignmentAnnotation ann : getAlignmentAnnotation()) - { - // only sequence-linked annotations can qualify (have a datasequence) - if (ann.sequenceRef == null) - { - continue; - } - boolean matchDatasequence = (ann.sequenceRef.getDatasetSequence() == datasequence); - final String annCalcId = ann.getCalcId(); - boolean matchCalcId = (annCalcId != null && annCalcId.equals(calcId)); - boolean matchLabel = (ann.label != null && ann.label.equals(label)); - if (matchDatasequence && matchCalcId && matchLabel) - { - result.add(ann); - } - } - return result; - } }