X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSequenceGroup.java;h=861595c55887924cedcba261d7028fdcc5e17837;hb=refs%2Fheads%2Fbug%2FJAL-3487-splash-JS;hp=62f9fd8fe2a5eb5d3d9c884f6b87bccd18e5470f;hpb=beff7ac7ab7be2c24ccb179be16b8816d2c18610;p=jalview.git diff --git a/src/jalview/datamodel/SequenceGroup.java b/src/jalview/datamodel/SequenceGroup.java index 62f9fd8..861595c 100755 --- a/src/jalview/datamodel/SequenceGroup.java +++ b/src/jalview/datamodel/SequenceGroup.java @@ -88,7 +88,7 @@ public class SequenceGroup implements AnnotatedCollectionI /** * group members */ - private List sequences = new ArrayList<>(); + private List sequences; /** * representative sequence for this group (if any) @@ -162,6 +162,7 @@ public class SequenceGroup implements AnnotatedCollectionI { groupName = "JGroup:" + this.hashCode(); cs = new ResidueShader(); + sequences = new ArrayList<>(); } /** @@ -243,6 +244,17 @@ public class SequenceGroup implements AnnotatedCollectionI } } + /** + * Constructor that copies the given list of sequences + * + * @param seqs + */ + public SequenceGroup(List seqs) + { + this(); + this.sequences.addAll(seqs); + } + public boolean isShowSequenceLogo() { return showSequenceLogo;