X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSequenceI.java;fp=src%2Fjalview%2Fdatamodel%2FSequenceI.java;h=20362dd6b175235c5834f4828c4df3b35c7f98f4;hb=cef7be0f9008ff15318e3479a5de35e127071ef3;hp=271f25a25b7309e8cc1fa3b68dc88e695424ec77;hpb=46406ae21c62b964714ce136c9d692985c17211d;p=jalview.git

diff --git a/src/jalview/datamodel/SequenceI.java b/src/jalview/datamodel/SequenceI.java
index 271f25a..20362dd 100755
--- a/src/jalview/datamodel/SequenceI.java
+++ b/src/jalview/datamodel/SequenceI.java
@@ -20,6 +20,7 @@
  */
 package jalview.datamodel;
 
+import java.util.BitSet;
 import java.util.List;
 import java.util.Vector;
 
@@ -495,4 +496,10 @@ public interface SequenceI extends ASequenceI
 
   void setPreviousPosition(int previousPosition);
 
+  /**
+   * 
+   * @return BitSet corresponding to index [0,length) where Comparison.isGap()
+   *         returns true.
+   */
+  BitSet getInsertionsAsBits();
 }