X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSequenceI.java;h=285b7a89c667ae12250ec6cc507a0428acf85e07;hb=dfa04e77181fccfa6229ffef1591fc9c622d9b39;hp=aded6e8faae93b48031aa0c6fcd7d903fdd17186;hpb=59d682209891099d46b960509907c79e3fb276fe;p=jalview.git

diff --git a/src/jalview/datamodel/SequenceI.java b/src/jalview/datamodel/SequenceI.java
index aded6e8..285b7a8 100755
--- a/src/jalview/datamodel/SequenceI.java
+++ b/src/jalview/datamodel/SequenceI.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
- * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
+ * Copyright (C) 2014 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -14,6 +14,7 @@
  * PURPOSE.  See the GNU General Public License for more details.
  * 
  * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.datamodel;
 
@@ -97,21 +98,21 @@ public interface SequenceI
   public String getSequenceAsString();
 
   /**
-   * get a range on the seuqence as a string
+   * get a range on the sequence as a string
    * 
    * @param start
-   *          DOCUMENT ME!
+   *          position relative to start of sequence including gaps (from 0)
    * @param end
-   *          DOCUMENT ME!
+   *          position relative to start of sequence including gaps (from 0)
    * 
-   * @return DOCUMENT ME!
+   * @return String containing all gap and symbols in specified range
    */
   public String getSequenceAsString(int start, int end);
 
   /**
-   * DOCUMENT ME!
+   * Get the sequence as a character array
    * 
-   * @return DOCUMENT ME!
+   * @return seqeunce and any gaps
    */
   public char[] getSequence();