X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSequenceI.java;h=ca12c8310b692cb4a678d08ddda9f639f06bbd14;hb=08b87509ada06ac8614424247346daef4054b41a;hp=013897d14a079e0309b50b7d4846a169dc4ef349;hpb=fbf6a124e2ffe81bcde747fda6f004748eb3b479;p=jalview.git diff --git a/src/jalview/datamodel/SequenceI.java b/src/jalview/datamodel/SequenceI.java index 013897d..ca12c83 100755 --- a/src/jalview/datamodel/SequenceI.java +++ b/src/jalview/datamodel/SequenceI.java @@ -386,6 +386,12 @@ public interface SequenceI extends ASequenceI */ public boolean addSequenceFeature(SequenceFeature sf); + /** + * Deletes the feature from the sequence (if found). To be precise, deletes + * the first feature {@code f} found where {@code f.equals(sf)}. + * + * @param sf + */ public void deleteFeature(SequenceFeature sf); public void setDatasetSequence(SequenceI seq); @@ -609,12 +615,20 @@ public interface SequenceI extends ASequenceI public void resetColors(); /** - * @author Bob Hanson 2019.07.30 - * - * allows passing the result ArrayList as a parameter to avoid unnecessary construction + * Answers a (possibly empty) list of features of the specified type that + * overlap the specified column position. If parameter {@code result} is not + * null, features are appended to it and the (possibly extended) list is + * returned. + */ + List findFeatures(int column, String type, + List result); + + /** + * Answers true if this store contains at least one feature, else false * + * @return */ - void findFeatures(int column, String type, List result); + public boolean hasFeatures(String type); }