X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSequenceI.java;h=ea49f6809ded43338c41cfb22260c4757f3d63b6;hb=d6e1bbede5adc04f34c969213ac6a4c6d9e5d34a;hp=089a5f68e5491351841bd88eb617f9005caafd53;hpb=951d723ee7a01b954f0af39645e2f1102c1fc99a;p=jalview.git

diff --git a/src/jalview/datamodel/SequenceI.java b/src/jalview/datamodel/SequenceI.java
index 089a5f6..ea49f68 100755
--- a/src/jalview/datamodel/SequenceI.java
+++ b/src/jalview/datamodel/SequenceI.java
@@ -183,14 +183,6 @@ public interface SequenceI
      */
     public void insertCharAt(int i, char c);
 
-    /**
-     * DOCUMENT ME!
-     *
-     * @param i DOCUMENT ME!
-     * @param c DOCUMENT ME!
-     * @param chop DOCUMENT ME!
-     */
-    public void insertCharAt(int i, char c, boolean chop);
 
     /**
      * DOCUMENT ME!
@@ -256,4 +248,14 @@ public interface SequenceI
 
     public void addAlignmentAnnotation(AlignmentAnnotation annotation);
 
+    public SequenceGroup getHiddenSequences();
+
+    public void addHiddenSequence(SequenceI seq);
+
+    public void showHiddenSequence(SequenceI seq);
+
+    public void changeCase(boolean toUpper, int start, int end);
+
+    public void toggleCase(int start, int end);
+
 }