X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2Ffeatures%2FSequenceFeaturesI.java;h=ca0283e71470bdfbc060a164b1a10df2eb0bc340;hb=09d3b755d9b00f5c3acb44049aedd49361dc0690;hp=40beae367d219f435a214abf450bb7fa97211f8c;hpb=5fc820296bd27badf71036b9d79980277d1dd095;p=jalview.git diff --git a/src/jalview/datamodel/features/SequenceFeaturesI.java b/src/jalview/datamodel/features/SequenceFeaturesI.java index 40beae3..ca0283e 100644 --- a/src/jalview/datamodel/features/SequenceFeaturesI.java +++ b/src/jalview/datamodel/features/SequenceFeaturesI.java @@ -1,3 +1,23 @@ +/* + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors + * + * This file is part of Jalview. + * + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. + */ package jalview.datamodel.features; import jalview.datamodel.SequenceFeature; @@ -62,9 +82,9 @@ public interface SequenceFeaturesI String group, String... type); /** - * Answers a list of all features stored, whose type either matches one of the - * given ontology terms, or is a specialisation of a term in the Sequence - * Ontology. Results are returned in no particular guaranteed order. + * Answers a list of all features stored, whose type either matches, or is a + * specialisation (in the Sequence Ontology) of, one of the given terms. + * Results are returned in no particular order. * * @param ontologyTerm * @return @@ -203,4 +223,9 @@ public interface SequenceFeaturesI * @param shiftBy */ boolean shiftFeatures(int fromPosition, int shiftBy); -} \ No newline at end of file + + /** + * Deletes all positional and non-positional features + */ + void deleteAll(); +}