X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2Fxdb%2Fembl%2FEmblSequence.java;h=92c424b8d96d1d3fd5b8aede03695d94df35326b;hb=88515cdb74e4603a40c8c1dca14107b5ca503e04;hp=5a18929ea710d5e47d3117a9b15de13b25a594ff;hpb=5071850e8470077a8ac2bdc6a53908c70ad5526d;p=jalview.git

diff --git a/src/jalview/datamodel/xdb/embl/EmblSequence.java b/src/jalview/datamodel/xdb/embl/EmblSequence.java
index 5a18929..92c424b 100644
--- a/src/jalview/datamodel/xdb/embl/EmblSequence.java
+++ b/src/jalview/datamodel/xdb/embl/EmblSequence.java
@@ -43,6 +43,7 @@ public class EmblSequence
    */
   public void setSequence(String sequence)
   {
-    this.sequence = sequence;
+    // remove spaces introduced by unmarshalling of newline characters
+    this.sequence = sequence.replace(" ", "");
   }
 }