X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2Fxdb%2Fembl%2FQualifier.java;h=87a45de81d70be9fbe97d16a4cd6ab35d8c1985e;hb=838e4f91d4a53dd315640dbc9ff6ef7a815ee576;hp=27806ffdd1edc6ac81ef539a5cf628eb6d63c3f6;hpb=506d60f0e188723ddc91c26824b41ac7034df3fe;p=jalview.git diff --git a/src/jalview/datamodel/xdb/embl/Qualifier.java b/src/jalview/datamodel/xdb/embl/Qualifier.java index 27806ff..87a45de 100644 --- a/src/jalview/datamodel/xdb/embl/Qualifier.java +++ b/src/jalview/datamodel/xdb/embl/Qualifier.java @@ -1,23 +1,31 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4) - * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b1) + * Copyright (C) 2015 The Jalview Authors * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation; either version 2 - * of the License, or (at your option) any later version. + * This file is part of Jalview. * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. * * You should have received a copy of the GNU General Public License - * along with this program; if not, write to the Free Software - * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.datamodel.xdb.embl; +/** + * Data model for a <qualifier> child element of a <feature> read + * from an EMBL query reply + * + * @see embl_mapping.xml + */ public class Qualifier { String name; @@ -36,7 +44,7 @@ public class Qualifier /** * @param name - * the name to set + * the name to set */ public void setName(String name) { @@ -53,7 +61,7 @@ public class Qualifier /** * @param values - * the values to set + * the values to set */ public void setValues(String[] values) { @@ -62,6 +70,7 @@ public class Qualifier public void addEvidence(String qevidence) { + // TODO - not used? can remove? if (evidence == null) { evidence = new String[1]; @@ -77,6 +86,7 @@ public class Qualifier public void addValues(String value) { + // TODO - not used? can remove? if (values == null) { values = new String[1]; @@ -100,7 +110,7 @@ public class Qualifier /** * @param evidence - * the evidence to set + * the evidence to set */ public void setEvidence(String[] evidence) {