X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fext%2Fensembl%2FEnsemblCds.java;h=1f875a74a8faf261c6f272aa0a11f3a8a544a752;hb=0b8abe58b934e03c34575b06d532a99f0ba70196;hp=e366569791ac6d13008d330f022ad038905d7956;hpb=ecc50d775a514f9840cdcc10a9d5b1e49c60582c;p=jalview.git

diff --git a/src/jalview/ext/ensembl/EnsemblCds.java b/src/jalview/ext/ensembl/EnsemblCds.java
index e366569..1f875a7 100644
--- a/src/jalview/ext/ensembl/EnsemblCds.java
+++ b/src/jalview/ext/ensembl/EnsemblCds.java
@@ -45,9 +45,14 @@ public class EnsemblCds extends EnsemblSeqProxy
    * itself.
    */
   @Override
-  protected boolean retainFeature(String type)
+  protected boolean retainFeature(SequenceFeature sf, String accessionId)
   {
-    return !SequenceOntology.getInstance().isA(type, SequenceOntology.CDS);
+    if (SequenceOntology.getInstance().isA(sf.getType(),
+            SequenceOntology.CDS))
+    {
+      return false;
+    }
+    return featureMayBelong(sf, accessionId);
   }
 
   /**