X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fext%2Fensembl%2FEnsemblProtein.java;h=0280f1613a16c6f17ed32b44ac345364ebd56685;hb=5a631296dd1dcc1df7b50487a647c27333696c74;hp=1554a0b1e806524fe66b766efa33896e43df68ae;hpb=604cbee405a837565ba1a74aa9bddd62aed685ab;p=jalview.git diff --git a/src/jalview/ext/ensembl/EnsemblProtein.java b/src/jalview/ext/ensembl/EnsemblProtein.java index 1554a0b..0280f16 100644 --- a/src/jalview/ext/ensembl/EnsemblProtein.java +++ b/src/jalview/ext/ensembl/EnsemblProtein.java @@ -22,7 +22,9 @@ package jalview.ext.ensembl; import jalview.datamodel.AlignmentI; import jalview.datamodel.SequenceFeature; +import jalview.datamodel.SequenceI; +import java.util.ArrayList; import java.util.List; import com.stevesoft.pat.Regex; @@ -108,10 +110,10 @@ public class EnsemblProtein extends EnsemblSeqProxy } @Override - protected boolean identifiesSequence(SequenceFeature sf, String accId) + protected List getIdentifyingFeatures(SequenceI seq, + String accId) { - // not applicable - protein sequence is not a 'subset' of genomic sequence - return false; + return new ArrayList<>(); } @Override