X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fext%2Fensembl%2FEnsemblProtein.java;h=97796a5d418a01d6a457cd99a8fc909838e25b14;hb=6fb341da6a316869ba5fc87c146c30d1279f06fa;hp=fb79ccfdab75d765ce09e72241908fdde6d83c0a;hpb=e24933a537e0f640c75d4685c468615872bc77fc;p=jalview.git

diff --git a/src/jalview/ext/ensembl/EnsemblProtein.java b/src/jalview/ext/ensembl/EnsemblProtein.java
index fb79ccf..97796a5 100644
--- a/src/jalview/ext/ensembl/EnsemblProtein.java
+++ b/src/jalview/ext/ensembl/EnsemblProtein.java
@@ -8,6 +8,12 @@ import java.util.List;
 
 import com.stevesoft.pat.Regex;
 
+/**
+ * A client to fetch protein translated sequence for an Ensembl identifier
+ * 
+ * @author gmcarstairs
+ *
+ */
 public class EnsemblProtein extends EnsemblSeqProxy
 {
   /*
@@ -21,11 +27,24 @@ public class EnsemblProtein extends EnsemblSeqProxy
   private static final List<String> CROSSREFS = Arrays.asList(new String[] {
       "PDB", "Uniprot/SPTREMBL", "Uniprot/SWISSPROT" });
 
+  /**
+   * Default constructor (to use rest.ensembl.org)
+   */
   public EnsemblProtein()
   {
     super();
   }
 
+  /**
+   * Constructor given the target domain to fetch data from
+   * 
+   * @param d
+   */
+  public EnsemblProtein(String d)
+  {
+    super(d);
+  }
+
   @Override
   public String getDbName()
   {