X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fext%2Fjmol%2FJmolParser.java;h=f08e40ed7f8c964be64ad32ff0d969342636c7f5;hb=f831ddf7f52d6c4a1918e87d94877b22bd322648;hp=180da8f449f8044e4f522fb5f758a5dc1b4fd277;hpb=2681593fa6810815547b688b89424c837cac1240;p=jalview.git diff --git a/src/jalview/ext/jmol/JmolParser.java b/src/jalview/ext/jmol/JmolParser.java index 180da8f..f08e40e 100644 --- a/src/jalview/ext/jmol/JmolParser.java +++ b/src/jalview/ext/jmol/JmolParser.java @@ -24,6 +24,7 @@ import jalview.datamodel.AlignmentAnnotation; import jalview.datamodel.Annotation; import jalview.datamodel.PDBEntry; import jalview.datamodel.SequenceI; +import jalview.io.DataSourceType; import jalview.io.FileParse; import jalview.io.StructureFile; import jalview.schemes.ResidueProperties; @@ -59,9 +60,10 @@ public class JmolParser extends StructureFile implements JmolStatusListener { Viewer viewer = null; - public JmolParser(String inFile, String type) throws IOException + public JmolParser(String inFile, DataSourceType sourceType) + throws IOException { - super(inFile, type); + super(inFile, sourceType); } public JmolParser(FileParse fp) throws IOException @@ -470,7 +472,7 @@ public class JmolParser extends StructureFile implements JmolStatusListener * Not implemented - returns null */ @Override - public String print() + public String print(SequenceI[] seqs, boolean jvSuffix) { return null; }