X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fext%2Fvarna%2FJalviewVarnaBinding.java;h=089ee647d69d899723f0a2d8aa0a611084f92b98;hb=1b277fdca45c13f59c3887780f14a37bb1beeb60;hp=65a2665a84c1e7b0fe86e97d757cd66c966a9b5f;hpb=722f0bee96b96ceeb8ef69b3ccd1aeff13786b2b;p=jalview.git diff --git a/src/jalview/ext/varna/JalviewVarnaBinding.java b/src/jalview/ext/varna/JalviewVarnaBinding.java index 65a2665..089ee64 100644 --- a/src/jalview/ext/varna/JalviewVarnaBinding.java +++ b/src/jalview/ext/varna/JalviewVarnaBinding.java @@ -18,6 +18,7 @@ package jalview.ext.varna; import java.io.File; + import java.net.URL; import java.util.*; import java.applet.Applet; @@ -44,6 +45,9 @@ import org.jmol.viewer.Viewer; import jalview.schemes.*; +import fr.orsay.lri.varna.applications.*; + + public abstract class JalviewVarnaBinding implements StructureListener, JmolStatusListener, SequenceStructureBinding, JmolSelectionListener, ComponentListener, StructureSelectionManagerProvider @@ -103,6 +107,8 @@ public abstract class JalviewVarnaBinding implements StructureListener, int frameNo = 0; protected JmolPopup jmolpopup; + + protected VARNAGUI varnagui; String lastCommand;