X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fext%2Fvarna%2FRnaModel.java;h=b39ea948df9dffc9f1b494278f9583f18a405997;hb=fddf3084802b37e5cee17829e32692a4aac3e60d;hp=44c6cf6bac86b4212f8fdfae96c4754b828d6ff6;hpb=7e5b8f22ed3a1b76f6389a4c7d6b7ebc7f9bf74d;p=jalview.git diff --git a/src/jalview/ext/varna/RnaModel.java b/src/jalview/ext/varna/RnaModel.java index 44c6cf6..b39ea94 100644 --- a/src/jalview/ext/varna/RnaModel.java +++ b/src/jalview/ext/varna/RnaModel.java @@ -1,10 +1,10 @@ package jalview.ext.varna; -import fr.orsay.lri.varna.models.rna.RNA; - import jalview.datamodel.AlignmentAnnotation; import jalview.datamodel.SequenceI; +import fr.orsay.lri.varna.models.rna.RNA; + /** * Data bean wrapping the data items that define one RNA view */ @@ -20,18 +20,13 @@ public class RnaModel public final RNA rna; - // path to a file holding VARNA session state XML - public final String varnaSession; - public RnaModel(String t, AlignmentAnnotation aa, SequenceI s, RNA r, - boolean g, - String sessionFile) + boolean g) { title = t; ann = aa; seq = s; - gapped = g; rna = r; - varnaSession = sessionFile; + gapped = g; } } \ No newline at end of file