X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Ffts%2Fcore%2FGFTSPanel.java;h=a58171799ea49c72dfc7216a618484dcb1bb101c;hb=0ce95d9c8581b19c1d636f67f67dd670e41f1ca9;hp=cae271d23e2f5cf6a9f922e6251c3cc0cfeb807b;hpb=0f2e9e7f2244495f17a7facc5925f74c3b322324;p=jalview.git diff --git a/src/jalview/fts/core/GFTSPanel.java b/src/jalview/fts/core/GFTSPanel.java index cae271d..a581717 100644 --- a/src/jalview/fts/core/GFTSPanel.java +++ b/src/jalview/fts/core/GFTSPanel.java @@ -28,6 +28,8 @@ import jalview.gui.Desktop; import jalview.gui.IProgressIndicator; import jalview.gui.JvSwingUtils; import jalview.gui.SequenceFetcher; +import jalview.io.cache.AppCache; +import jalview.io.cache.Cacheable; import jalview.util.MessageManager; import java.awt.BorderLayout; @@ -35,22 +37,28 @@ import java.awt.CardLayout; import java.awt.Dimension; import java.awt.event.ActionEvent; import java.awt.event.ActionListener; +import java.awt.event.FocusAdapter; import java.awt.event.FocusEvent; import java.awt.event.FocusListener; +import java.awt.event.ItemEvent; +import java.awt.event.ItemListener; import java.awt.event.KeyAdapter; import java.awt.event.KeyEvent; import java.awt.event.MouseAdapter; import java.awt.event.MouseEvent; +import java.text.DecimalFormat; import java.util.ArrayList; import java.util.Arrays; import java.util.Collection; import java.util.Collections; import java.util.Comparator; +import java.util.HashSet; import java.util.List; import javax.swing.ImageIcon; import javax.swing.JButton; import javax.swing.JComboBox; +import javax.swing.JComponent; import javax.swing.JFrame; import javax.swing.JInternalFrame; import javax.swing.JLabel; @@ -58,13 +66,15 @@ import javax.swing.JPanel; import javax.swing.JScrollPane; import javax.swing.JTabbedPane; import javax.swing.JTable; -import javax.swing.JTextField; import javax.swing.Timer; import javax.swing.event.ChangeEvent; import javax.swing.event.ChangeListener; import javax.swing.event.DocumentEvent; import javax.swing.event.DocumentListener; +import javax.swing.event.InternalFrameEvent; import javax.swing.table.DefaultTableModel; +import javax.swing.table.TableColumn; +import javax.swing.text.JTextComponent; /** * This class provides the swing GUI layout for FTS Panel and implements most of @@ -75,12 +85,12 @@ import javax.swing.table.DefaultTableModel; */ @SuppressWarnings("serial") -public abstract class GFTSPanel extends JPanel implements GFTSPanelI +public abstract class GFTSPanel extends JPanel implements GFTSPanelI, Cacheable { protected JInternalFrame mainFrame = new JInternalFrame( getFTSFrameTitle()); - protected IProgressIndicator progressIdicator; + protected IProgressIndicator progressIndicator; protected JComboBox cmb_searchTarget = new JComboBox(); @@ -90,14 +100,109 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI protected JButton btn_cancel = new JButton(); - protected JTextField txt_search = new JTextField(20); + protected JComboBox txt_search; protected SequenceFetcher seqFetcher; protected Collection wantedFields; + private String lastSearchTerm = ""; + + protected JButton btn_next_page = new JButton(); + + protected JButton btn_prev_page = new JButton(); + + protected StringBuilder errorWarning = new StringBuilder(); + + protected ImageIcon warningImage = new ImageIcon(getClass().getResource( + "/images/warning.gif")); + + protected ImageIcon loadingImage = new ImageIcon(getClass().getResource( + "/images/loading.gif")); + + protected ImageIcon balnkPlaceholderImage = new ImageIcon(getClass() + .getResource("/images/blank_16x16_placeholder.png")); + + protected JLabel lbl_warning = new JLabel(warningImage); + + protected JLabel lbl_loading = new JLabel(loadingImage); + + protected JLabel lbl_blank = new JLabel(balnkPlaceholderImage); + + private JTabbedPane tabbedPane = new JTabbedPane(); + + private JPanel pnl_actions = new JPanel(); + + private JPanel pnl_results = new JPanel(new CardLayout()); + + private JPanel pnl_inputs = new JPanel(); + + private BorderLayout mainLayout = new BorderLayout(); + + protected Object[] previousWantedFields; + + protected int resultSetCount; + + protected int totalResultSetCount; + + protected int offSet; + + protected int pageLimit; + + protected HashSet paginatorCart = new HashSet(); + + protected static final DecimalFormat totalNumberformatter = new DecimalFormat( + "###,###"); + private JTable tbl_summary = new JTable() { + private boolean inLayout; + + @Override + public boolean getScrollableTracksViewportWidth() + { + return hasExcessWidth(); + + } + + @Override + public void doLayout() + { + if (hasExcessWidth()) + { + autoResizeMode = AUTO_RESIZE_SUBSEQUENT_COLUMNS; + } + inLayout = true; + super.doLayout(); + inLayout = false; + autoResizeMode = AUTO_RESIZE_OFF; + } + + protected boolean hasExcessWidth() + { + return getPreferredSize().width < getParent().getWidth(); + } + + @Override + public void columnMarginChanged(ChangeEvent e) + { + if (isEditing()) + { + removeEditor(); + } + TableColumn resizingColumn = getTableHeader().getResizingColumn(); + // Need to do this here, before the parent's + // layout manager calls getPreferredSize(). + if (resizingColumn != null && autoResizeMode == AUTO_RESIZE_OFF + && !inLayout) + { + resizingColumn.setPreferredWidth(resizingColumn.getWidth()); + String colHeader = resizingColumn.getHeaderValue().toString(); + getTempUserPrefs().put(colHeader, resizingColumn.getWidth()); + } + resizeAndRepaint(); + } + @Override public String getToolTipText(MouseEvent evt) { @@ -127,37 +232,21 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI } }; - protected StringBuilder errorWarning = new StringBuilder(); - protected JScrollPane scrl_searchResult = new JScrollPane(tbl_summary); - protected ImageIcon warningImage = new ImageIcon(getClass().getResource( - "/images/warning.gif")); - - protected ImageIcon loadingImage = new ImageIcon(getClass().getResource( - "/images/loading.gif")); - - protected JLabel lbl_warning = new JLabel(warningImage); - - protected JLabel lbl_loading = new JLabel(loadingImage); - - private JTabbedPane tabbedPane = new JTabbedPane(); - - private JPanel pnl_actions = new JPanel(); - - private JPanel pnl_results = new JPanel(new CardLayout()); - - private JPanel pnl_inputs = new JPanel(); - - private BorderLayout mainLayout = new BorderLayout(); - - protected Object[] previousWantedFields; - public GFTSPanel() { try { jbInit(); + mainFrame.addFocusListener(new FocusAdapter() + { + @Override + public void focusGained(FocusEvent e) + { + txt_search.requestFocusInWindow(); + } + }); mainFrame.invalidate(); mainFrame.pack(); } catch (Exception e) @@ -173,12 +262,23 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI */ private void jbInit() throws Exception { + + txt_search = new JComboBox(); + txt_search.setEditable(true); + txt_search + .setPrototypeDisplayValue("XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX"); + populateCmbSearchTargetOptions(); + Integer width = getTempUserPrefs().get("FTSPanel.width") == null ? 800 + : getTempUserPrefs().get("FTSPanel.width"); + Integer height = getTempUserPrefs().get("FTSPanel.height") == null ? 400 + : getTempUserPrefs().get("FTSPanel.height"); lbl_warning.setVisible(false); lbl_warning.setFont(new java.awt.Font("Verdana", 0, 12)); lbl_loading.setVisible(false); lbl_loading.setFont(new java.awt.Font("Verdana", 0, 12)); + lbl_blank.setVisible(true); + lbl_blank.setFont(new java.awt.Font("Verdana", 0, 12)); - tbl_summary.setAutoResizeMode(JTable.AUTO_RESIZE_ALL_COLUMNS); tbl_summary.setAutoCreateRowSorter(true); tbl_summary.getTableHeader().setReorderingAllowed(false); tbl_summary.addMouseListener(new MouseAdapter() @@ -274,6 +374,66 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI } } }); + btn_next_page.setEnabled(false); + btn_next_page.setToolTipText(MessageManager + .getString("label.next_page_tooltip")); + btn_next_page.setFont(new java.awt.Font("Verdana", 0, 12)); + btn_next_page.setText(MessageManager.getString("action.next_page")); + btn_next_page.addActionListener(new java.awt.event.ActionListener() + { + @Override + public void actionPerformed(ActionEvent e) + { + nextPageAction(); + } + }); + btn_next_page.addKeyListener(new KeyAdapter() + { + @Override + public void keyPressed(KeyEvent evt) + { + if (evt.getKeyCode() == KeyEvent.VK_ENTER) + { + nextPageAction(); + } + } + }); + + btn_prev_page.setEnabled(false); + btn_prev_page.setToolTipText(MessageManager + .getString("label.prev_page_tooltip")); + btn_prev_page.setFont(new java.awt.Font("Verdana", 0, 12)); + btn_prev_page.setText(MessageManager.getString("action.prev_page")); + btn_prev_page.addActionListener(new java.awt.event.ActionListener() + { + @Override + public void actionPerformed(ActionEvent e) + { + prevPageAction(); + } + }); + btn_prev_page.addKeyListener(new KeyAdapter() + { + @Override + public void keyPressed(KeyEvent evt) + { + if (evt.getKeyCode() == KeyEvent.VK_ENTER) + { + prevPageAction(); + } + } + }); + + if (isPaginationEnabled()) + { + btn_prev_page.setVisible(true); + btn_next_page.setVisible(true); + } + else + { + btn_prev_page.setVisible(false); + btn_next_page.setVisible(false); + } btn_cancel.setFont(new java.awt.Font("Verdana", 0, 12)); btn_cancel.setText(MessageManager.getString("action.cancel")); @@ -296,78 +456,86 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI } } }); - - scrl_searchResult.setPreferredSize(new Dimension(500, 300)); - scrl_searchResult - .setHorizontalScrollBarPolicy(JScrollPane.HORIZONTAL_SCROLLBAR_NEVER); + scrl_searchResult.setPreferredSize(new Dimension(width, height)); cmb_searchTarget.setFont(new java.awt.Font("Verdana", 0, 12)); - cmb_searchTarget.addActionListener(new ActionListener() + cmb_searchTarget.addItemListener(new ItemListener() { @Override - public void actionPerformed(ActionEvent e) + public void itemStateChanged(ItemEvent e) { - String tooltipText; - if ("all".equalsIgnoreCase(getCmbSearchTarget().getSelectedItem() - .toString())) - { - tooltipText = MessageManager.getString("label.search_all"); - } - else if ("pdb id".equalsIgnoreCase(getCmbSearchTarget() - .getSelectedItem().toString())) + if (e.getStateChange() == ItemEvent.SELECTED) { - tooltipText = MessageManager - .getString("label.separate_multiple_accession_ids"); - } - else - { - tooltipText = MessageManager.formatMessage( - "label.separate_multiple_query_values", - new Object[] { getCmbSearchTarget().getSelectedItem() - .toString() }); + String tooltipText; + if ("all".equalsIgnoreCase(getCmbSearchTarget().getSelectedItem() + .toString())) + { + tooltipText = MessageManager.getString("label.search_all"); + } + else if ("pdb id".equalsIgnoreCase(getCmbSearchTarget() + .getSelectedItem().toString())) + { + tooltipText = MessageManager + .getString("label.separate_multiple_accession_ids"); + } + else + { + tooltipText = MessageManager.formatMessage( + "label.separate_multiple_query_values", + new Object[] { getCmbSearchTarget().getSelectedItem() + .toString() }); + } + txt_search.setToolTipText(JvSwingUtils.wrapTooltip(true, + tooltipText)); + searchAction(true); } - txt_search.setToolTipText(JvSwingUtils.wrapTooltip(true, - tooltipText)); - searchAction(); } }); + - populateCmbSearchTargetOptions(); txt_search.setFont(new java.awt.Font("Verdana", 0, 12)); - txt_search.addKeyListener(new KeyAdapter() + txt_search.getEditor().getEditorComponent() + .addKeyListener(new KeyAdapter() { @Override public void keyPressed(KeyEvent e) { if (e.getKeyCode() == KeyEvent.VK_ENTER) { - if (txt_search.getText() == null - || txt_search.getText().isEmpty()) + if (getTypedText() == null || getTypedText().isEmpty()) { return; } - if ("pdb id".equalsIgnoreCase(getCmbSearchTarget() + String primaryKeyName = getFTSRestClient().getPrimaryKeyColumn() + .getName(); + if (primaryKeyName.equalsIgnoreCase(getCmbSearchTarget() .getSelectedItem().toString())) { - transferToSequenceFetcher(txt_search.getText()); + transferToSequenceFetcher(getTypedText()); } } } }); final DeferredTextInputListener listener = new DeferredTextInputListener( - 500, - new ActionListener() + 1500, new ActionListener() { @Override public void actionPerformed(ActionEvent e) { - searchAction(); + if (!getTypedText().equalsIgnoreCase(lastSearchTerm)) + { + searchAction(true); + paginatorCart.clear(); + lastSearchTerm = getTypedText(); + } } }, false); - txt_search.getDocument().addDocumentListener(listener); + ((JTextComponent) txt_search.getEditor().getEditorComponent()) + .getDocument().addDocumentListener(listener); + txt_search.addFocusListener(new FocusListener() { @Override @@ -379,7 +547,7 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI @Override public void focusLost(FocusEvent e) { - listener.stop(); + // listener.stop(); } }); @@ -407,17 +575,25 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI btn_back.setEnabled(false); btn_cancel.setEnabled(false); btn_ok.setEnabled(false); + btn_next_page.setEnabled(false); + btn_prev_page.setEnabled(false); + txt_search.setEnabled(false); + cmb_searchTarget.setEnabled(false); previousWantedFields = getFTSRestClient() - .getAllDefaulDisplayedDataColumns() - .toArray(new Object[0]); + .getAllDefaultDisplayedFTSDataColumns().toArray( + new Object[0]); } if (sourceTabbedPane.getTitleAt(index).equals(searchTabTitle)) { btn_back.setEnabled(true); btn_cancel.setEnabled(true); + refreshPaginatorState(); + txt_search.setEnabled(true); + cmb_searchTarget.setEnabled(true); if (wantedFieldsUpdated()) { - searchAction(); + searchAction(true); + paginatorCart.clear(); } else { @@ -427,7 +603,7 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI } }; tabbedPane.addChangeListener(changeListener); - tabbedPane.setPreferredSize(new Dimension(500, 300)); + tabbedPane.setPreferredSize(new Dimension(width, height)); tabbedPane.add(searchTabTitle, scrl_searchResult); tabbedPane.add(configureCols, new FTSDataColumnPreferences( PreferenceSource.SEARCH_SUMMARY, getFTSRestClient())); @@ -441,6 +617,9 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI pnl_inputs.add(txt_search); pnl_inputs.add(lbl_loading); pnl_inputs.add(lbl_warning); + pnl_inputs.add(lbl_blank); + pnl_inputs.add(btn_prev_page); + pnl_inputs.add(btn_next_page); this.setLayout(mainLayout); this.add(pnl_inputs, java.awt.BorderLayout.NORTH); @@ -449,7 +628,34 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI mainFrame.setVisible(true); mainFrame.setContentPane(this); mainFrame.setDefaultCloseOperation(JFrame.DISPOSE_ON_CLOSE); - Desktop.addInternalFrame(mainFrame, getFTSFrameTitle(), 800, 400); + mainFrame + .addInternalFrameListener(new javax.swing.event.InternalFrameAdapter() + { + @Override + public void internalFrameClosing(InternalFrameEvent e) + { + closeAction(); + } + }); + mainFrame.setVisible(true); + mainFrame.setContentPane(this); + mainFrame.setDefaultCloseOperation(JFrame.DISPOSE_ON_CLOSE); + Integer x = getTempUserPrefs().get("FTSPanel.x"); + Integer y = getTempUserPrefs().get("FTSPanel.y"); + if (x != null && y != null) + { + mainFrame.setLocation(x, y); + } + Desktop.addInternalFrame(mainFrame, getFTSFrameTitle(), width, height); + } + + protected void closeAction() + { + getTempUserPrefs().put("FTSPanel.width", this.getWidth()); + getTempUserPrefs().put("FTSPanel.height", pnl_results.getHeight()); + getTempUserPrefs().put("FTSPanel.x", mainFrame.getX()); + getTempUserPrefs().put("FTSPanel.y", mainFrame.getY()); + mainFrame.dispose(); } public class DeferredTextInputListener implements DocumentListener @@ -497,19 +703,19 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI { if (previousWantedFields == null) { - return true; + return false; } return Arrays.equals(getFTSRestClient() - .getAllDefaulDisplayedDataColumns() - .toArray(new Object[0]), previousWantedFields) ? false - : true; + .getAllDefaultDisplayedFTSDataColumns().toArray(new Object[0]), + previousWantedFields) ? false : true; } public void validateSelection() { - if (tbl_summary.getSelectedRows().length > 0) + if (tbl_summary.getSelectedRows().length > 0 + || !paginatorCart.isEmpty()) { btn_ok.setEnabled(true); } @@ -524,7 +730,7 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI return cmb_searchTarget; } - public JTextField getTxtSearch() + public JComboBox getTxtSearch() { return txt_search; } @@ -558,9 +764,11 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI protected void checkForErrors() { lbl_warning.setVisible(false); + lbl_blank.setVisible(true); if (errorWarning.length() > 0) { lbl_loading.setVisible(false); + lbl_blank.setVisible(false); lbl_warning.setToolTipText(JvSwingUtils.wrapTooltip(true, errorWarning.toString())); lbl_warning.setVisible(true); @@ -569,8 +777,8 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI protected void btn_back_ActionPerformed() { - mainFrame.dispose(); - new SequenceFetcher(progressIdicator); + closeAction(); + new SequenceFetcher(progressIndicator); } protected void disableActionButtons() @@ -582,7 +790,7 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI protected void btn_cancel_ActionPerformed() { - mainFrame.dispose(); + closeAction(); } /** @@ -616,10 +824,8 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI } } - public void transferToSequenceFetcher(String ids) { - // mainFrame.dispose(); seqFetcher.getTextArea().setText(ids); Thread worker = new Thread(seqFetcher); worker.start(); @@ -628,7 +834,8 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI @Override public String getTypedText() { - return txt_search.getText().trim(); + return txt_search.getEditor().getItem() == null ? "" : txt_search + .getEditor().getItem().toString().trim(); } @Override @@ -642,6 +849,7 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI lbl_loading.setVisible(false); errorWarning.setLength(0); lbl_warning.setVisible(false); + lbl_blank.setVisible(true); btn_ok.setEnabled(false); mainFrame.setTitle(getFTSFrameTitle()); referesh(); @@ -650,6 +858,18 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI } @Override + public void setPrevPageButtonEnabled(boolean isEnabled) + { + btn_prev_page.setEnabled(isEnabled); + } + + @Override + public void setNextPageButtonEnabled(boolean isEnabled) + { + btn_next_page.setEnabled(isEnabled); + } + + @Override public void setErrorMessage(String message) { errorWarning.append(message); @@ -664,11 +884,144 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI @Override public void setSearchInProgress(Boolean isSearchInProgress) { + lbl_blank.setVisible(!isSearchInProgress); lbl_loading.setVisible(isSearchInProgress); } + + @Override + public void prevPageAction() + { + updatePaginatorCart(); + if (offSet >= pageLimit) + { + offSet = offSet - pageLimit; + searchAction(false); + } + else + { + refreshPaginatorState(); + } + } + + @Override + public void nextPageAction() + { + updatePaginatorCart(); + offSet = offSet + pageLimit; + searchAction(false); + } + + public void updatePaginatorCart() + { + int primaryKeyColIndex = 0; + JTable resultTable = getResultTable(); + int totalRows = resultTable.getRowCount(); + try + { + primaryKeyColIndex = getFTSRestClient().getPrimaryKeyColumIndex( + wantedFields, false); + } catch (Exception e) + { + e.printStackTrace(); + } + + for (int row = 0; row < totalRows; row++) + { + String id = (String) resultTable.getValueAt(row, primaryKeyColIndex); + if (paginatorCart.contains(id)) + { + paginatorCart.remove(id); + } + } + int[] selectedRows = resultTable.getSelectedRows(); + for (int summaryRow : selectedRows) + { + String idStr = resultTable.getValueAt(summaryRow, primaryKeyColIndex) + .toString(); + paginatorCart.add(idStr); + } + } + + public void updateSummaryTableSelections() + { + JTable resultTable = getResultTable(); + if (paginatorCart.isEmpty()) + { + return; + } + int primaryKeyColIndex = 0; + try + { + primaryKeyColIndex = getFTSRestClient().getPrimaryKeyColumIndex( + wantedFields, false); + } catch (Exception e) + { + e.printStackTrace(); + } + int totalRows = resultTable.getRowCount(); + for (int row = 0; row < totalRows; row++) + { + String id = (String) resultTable.getValueAt(row, primaryKeyColIndex); + if (paginatorCart.contains(id)) + { + resultTable.addRowSelectionInterval(row, row); + } + } + validateSelection(); + } + + public void refreshPaginatorState() + { + setPrevPageButtonEnabled(false); + setNextPageButtonEnabled(false); + if (resultSetCount == 0 && pageLimit == 0) + { + return; + } + if (resultSetCount >= pageLimit) + { + setNextPageButtonEnabled(true); + } + if (offSet >= pageLimit) + { + setPrevPageButtonEnabled(true); + } + } + public void referesh() { mainFrame.setTitle(getFTSFrameTitle()); } + + protected void fireCache() + { + AppCache.getInstance().updateCache(this); + } + + @Override + public void init() + { + // reset(); + } + + @Override + public JComponent getNextFocusableElement() + { + return mainFrame; + } + + @Override + public String getCacheKey() + { + return getCacheKey(); + } + + @Override + public JComboBox getCacheComboBox() + { + return txt_search; + } + + }