X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Ffts%2Fservice%2Fpdb%2FPDBFTSPanel.java;h=1dfabcea139bb5485286c0cd7e7fcc814ee3ad59;hb=853624fb32058cccc544ae7d13af6ad4b0800b6c;hp=5f5c71675b4aef0aab45c45d15f3c8c757c11318;hpb=a31a02714259bddad8163062afc770e89114d0d4;p=jalview.git

diff --git a/src/jalview/fts/service/pdb/PDBFTSPanel.java b/src/jalview/fts/service/pdb/PDBFTSPanel.java
index 5f5c716..1dfabce 100644
--- a/src/jalview/fts/service/pdb/PDBFTSPanel.java
+++ b/src/jalview/fts/service/pdb/PDBFTSPanel.java
@@ -45,13 +45,13 @@ public class PDBFTSPanel extends GFTSPanel
 
   public PDBFTSPanel(SequenceFetcher seqFetcher)
   {
+    super();
     pageLimit = PDBFTSRestClient.getInstance().getDefaultResponsePageSize();
     this.seqFetcher = seqFetcher;
-    this.progressIdicator = (seqFetcher == null) ? null : seqFetcher
+    this.progressIndicator = (seqFetcher == null) ? null : seqFetcher
             .getProgressIndicator();
   }
 
-
   @Override
   public void searchAction(boolean isFreshSearch)
   {
@@ -103,7 +103,7 @@ public class PDBFTSPanel extends GFTSPanel
           {
             getResultTable().setModel(
                     FTSRestResponse.getTableModel(request,
-                    resultList.getSearchSummary()));
+                            resultList.getSearchSummary()));
             FTSRestResponse.configureTableColumn(getResultTable(),
                     wantedFields, tempUserPrefs);
             getResultTable().setVisible(true);
@@ -116,10 +116,12 @@ public class PDBFTSPanel extends GFTSPanel
           String result = (resultSetCount > 0) ? MessageManager
                   .getString("label.results") : MessageManager
                   .getString("label.result");
-         
+
           if (isPaginationEnabled() && resultSetCount > 0)
           {
-            updateSearchFrameTitle(defaultFTSFrameTitle + " - " + result
+            updateSearchFrameTitle(defaultFTSFrameTitle
+                    + " - "
+                    + result
                     + " "
                     + totalNumberformatter.format((Number) (offSet + 1))
                     + " to "
@@ -127,8 +129,8 @@ public class PDBFTSPanel extends GFTSPanel
                             .format((Number) (offSet + resultSetCount))
                     + " of "
                     + totalNumberformatter
-                            .format((Number) totalResultSetCount)
-                    + " " + " (" + (endTime - startTime) + " milli secs)");
+                            .format((Number) totalResultSetCount) + " "
+                    + " (" + (endTime - startTime) + " milli secs)");
           }
           else
           {
@@ -136,7 +138,7 @@ public class PDBFTSPanel extends GFTSPanel
                     + resultSetCount + " " + result + " ("
                     + (endTime - startTime) + " milli secs)");
           }
-          
+
           setSearchInProgress(false);
           refreshPaginatorState();
           updateSummaryTableSelections();
@@ -192,8 +194,7 @@ public class PDBFTSPanel extends GFTSPanel
     try
     {
       primaryKeyColIndex = getFTSRestClient().getPrimaryKeyColumIndex(
-              wantedFields,
-              false);
+              wantedFields, false);
     } catch (Exception e)
     {
       e.printStackTrace();
@@ -203,8 +204,7 @@ public class PDBFTSPanel extends GFTSPanel
     for (int summaryRow : selectedRows)
     {
       String idStr = getResultTable().getValueAt(summaryRow,
-              primaryKeyColIndex)
-              .toString();
+              primaryKeyColIndex).toString();
       selectedIdsSet.add(getPDBIdwithSpecifiedChain(idStr, searchTerm));
     }
 
@@ -226,7 +226,6 @@ public class PDBFTSPanel extends GFTSPanel
     delayAndEnableActionButtons();
   }
 
-
   public static String getPDBIdwithSpecifiedChain(String pdbId,
           String searchTerm)
   {