X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Ffts%2Fservice%2Funiprot%2FUniprotFTSPanel.java;h=977abfa7850034c825fecf83da341216f4656db8;hb=e1cb1f4ff4ae05504c806d99395358629c807956;hp=748088d4c84332665d7d225c6f71d63c21611914;hpb=e3dcbe461d12e68b97cd81d599dc52d2e042dd28;p=jalview.git

diff --git a/src/jalview/fts/service/uniprot/UniprotFTSPanel.java b/src/jalview/fts/service/uniprot/UniprotFTSPanel.java
index 748088d..977abfa 100644
--- a/src/jalview/fts/service/uniprot/UniprotFTSPanel.java
+++ b/src/jalview/fts/service/uniprot/UniprotFTSPanel.java
@@ -26,6 +26,8 @@ import jalview.fts.api.FTSRestClientI;
 import jalview.fts.core.FTSRestRequest;
 import jalview.fts.core.FTSRestResponse;
 import jalview.fts.core.GFTSPanel;
+import jalview.gui.Help;
+import jalview.gui.Help.HelpId;
 import jalview.gui.SequenceFetcher;
 import jalview.util.MessageManager;
 
@@ -33,6 +35,8 @@ import java.util.HashMap;
 import java.util.HashSet;
 import java.util.Map;
 
+import javax.help.HelpSetException;
+
 @SuppressWarnings("serial")
 public class UniprotFTSPanel extends GFTSPanel
 {
@@ -44,14 +48,16 @@ public class UniprotFTSPanel extends GFTSPanel
 
   private static final String UNIPROT_FTS_CACHE_KEY = "CACHE.UNIPROT_FTS";
 
-  public UniprotFTSPanel(SequenceFetcher seqFetcher)
+  private static final String UNIPROT_AUTOSEARCH = "FTS.UNIPROT.AUTOSEARCH";
+
+  public UniprotFTSPanel(SequenceFetcher fetcher)
   {
-    super();
+    super(fetcher);
     pageLimit = UniProtFTSRestClient.getInstance()
             .getDefaultResponsePageSize();
-    this.seqFetcher = seqFetcher;
-    this.progressIndicator = (seqFetcher == null) ? null
-            : seqFetcher.getProgressIndicator();
+    this.seqFetcher = fetcher;
+    this.progressIndicator = (fetcher == null) ? null
+            : fetcher.getProgressIndicator();
   }
 
   @Override
@@ -85,15 +91,14 @@ public class UniprotFTSPanel extends GFTSPanel
           request.setSearchTerm(searchTerm);
           request.setOffSet(offSet);
           request.setWantedFields(wantedFields);
-          FTSRestClientI uniProtRestCleint = UniProtFTSRestClient
+          FTSRestClientI uniProtRestClient = UniProtFTSRestClient
                   .getInstance();
           FTSRestResponse resultList;
           try
           {
-            resultList = uniProtRestCleint.executeRequest(request);
+            resultList = uniProtRestClient.executeRequest(request);
           } catch (Exception e)
           {
-            e.printStackTrace();
             setErrorMessage(e.getMessage());
             checkForErrors();
             setSearchInProgress(false);
@@ -238,4 +243,22 @@ public class UniprotFTSPanel extends GFTSPanel
   {
     return UNIPROT_FTS_CACHE_KEY;
   }
+
+  @Override
+  public String getAutosearchPreference()
+  {
+    return UNIPROT_AUTOSEARCH;
+  }
+
+  @Override
+  protected void showHelp()
+  {
+    try
+    {
+      Help.showHelpWindow(HelpId.UniprotFts);
+    } catch (HelpSetException e1)
+    {
+      e1.printStackTrace();
+    }
+  }
 }