X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAlignExportOptions.java;fp=src%2Fjalview%2Fgui%2FAlignExportOptions.java;h=08ff021a6a7db77cb1b7fea34c096d3047c2871f;hb=9c98d4bd666346f6ad3892c5394b7da3be82d93e;hp=70601c98864edd2a393a81c560065e2ee0235689;hpb=c7b2143c9cf7c5e05ad63251f7d3910751b16d20;p=jalview.git

diff --git a/src/jalview/gui/AlignExportOptions.java b/src/jalview/gui/AlignExportOptions.java
index 70601c9..08ff021 100644
--- a/src/jalview/gui/AlignExportOptions.java
+++ b/src/jalview/gui/AlignExportOptions.java
@@ -109,8 +109,8 @@ public class AlignExportOptions extends JPanel
         MessageManager.getString("action.cancel") };
     dialog.showInternalDialog(this,
             MessageManager.getString("label.export_settings"),
-            JvOptionPane.OK_CANCEL_OPTION, JvOptionPane.PLAIN_MESSAGE,
-            null, options, MessageManager.getString("action.ok"));
+            JvOptionPane.OK_CANCEL_OPTION, JvOptionPane.PLAIN_MESSAGE, null,
+            options, MessageManager.getString("action.ok"));
   }
 
   /**
@@ -135,19 +135,19 @@ public class AlignExportOptions extends JPanel
     boolean set = chkHiddenSeqs.isEnabled() && isSelected;
     chkHiddenSeqs.setSelected(set);
     settings.setExportHiddenSequences(set);
-  
+
     set = chkHiddenCols.isEnabled() && isSelected;
     chkHiddenCols.setSelected(set);
     settings.setExportHiddenColumns(set);
-  
+
     set = isComplexAlignFile && chkExportAnnots.isEnabled() && isSelected;
     chkExportAnnots.setSelected(set);
     settings.setExportAnnotations(set);
-  
+
     set = isComplexAlignFile && chkExportFeats.isEnabled() && isSelected;
     chkExportFeats.setSelected(set);
     settings.setExportFeatures(set);
-  
+
     set = isComplexAlignFile && chkExportGrps.isEnabled() && isSelected;
     chkExportGrps.setSelected(set);
     settings.setExportGroups(set);
@@ -171,7 +171,7 @@ public class AlignExportOptions extends JPanel
         settings.setExportHiddenSequences(chkHiddenSeqs.isSelected());
       }
     });
-  
+
     chkHiddenCols.setText(
             MessageManager.getString("action.export_hidden_columns"));
     chkHiddenCols.addActionListener(new ActionListener()
@@ -182,7 +182,7 @@ public class AlignExportOptions extends JPanel
         settings.setExportHiddenColumns(chkHiddenCols.isSelected());
       }
     });
-  
+
     chkExportAnnots
             .setText(MessageManager.getString("action.export_annotations"));
     chkExportAnnots.addActionListener(new ActionListener()
@@ -193,7 +193,7 @@ public class AlignExportOptions extends JPanel
         settings.setExportAnnotations(chkExportAnnots.isSelected());
       }
     });
-  
+
     chkExportFeats
             .setText(MessageManager.getString("action.export_features"));
     chkExportFeats.addActionListener(new ActionListener()
@@ -204,7 +204,7 @@ public class AlignExportOptions extends JPanel
         settings.setExportFeatures(chkExportFeats.isSelected());
       }
     });
-  
+
     chkExportGrps.setText(MessageManager.getString("action.export_groups"));
     chkExportGrps.addActionListener(new ActionListener()
     {
@@ -214,14 +214,14 @@ public class AlignExportOptions extends JPanel
         settings.setExportGroups(chkExportGrps.isSelected());
       }
     });
-  
+
     JCheckBox chkAll = new JCheckBox(
             MessageManager.getString("action.select_all"));
-  
+
     JPanel hiddenRegionConfPanel = new JPanel(new BorderLayout());
     JPanel complexExportPanel = new JPanel(new BorderLayout());
     this.setLayout(new BorderLayout());
-  
+
     chkAll.addItemListener(new ItemListener()
     {
       @Override
@@ -230,30 +230,30 @@ public class AlignExportOptions extends JPanel
         checkAllAction(chkAll.isSelected());
       }
     });
-  
+
     hiddenRegionConfPanel.add(chkHiddenSeqs, BorderLayout.CENTER);
     hiddenRegionConfPanel.add(chkHiddenCols, BorderLayout.SOUTH);
     chkHiddenSeqs.setEnabled(hasHiddenSeq);
     chkHiddenCols.setEnabled(hasHiddenCols);
-  
+
     complexExportPanel.add(chkExportAnnots, BorderLayout.NORTH);
     complexExportPanel.add(chkExportFeats, BorderLayout.CENTER);
     complexExportPanel.add(chkExportGrps, BorderLayout.SOUTH);
-  
+
     JPanel actionPanel = new JPanel(new FlowLayout(FlowLayout.CENTER));
     actionPanel.add(chkAll);
-  
+
     JPanel optionsPanel = new JPanel();
     if (this.isComplexAlignFile)
     {
       optionsPanel.add(complexExportPanel);
     }
-  
+
     if (hasHiddenSeq || hasHiddenCols)
     {
       optionsPanel.add(hiddenRegionConfPanel);
     }
-  
+
     add(optionsPanel, BorderLayout.NORTH);
     add(actionPanel, BorderLayout.SOUTH);
   }