X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAlignFrame.java;h=764b19243978e099b3edea3f3188debb77fd2aa7;hb=1e0a944431b347efefe067fdecb6f28fe4c187a8;hp=01353d893f56dfd4803356249fd9db4fff83586d;hpb=195524abaf46b6993e8ed348a2fa16fc3a60e742;p=jalview.git diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java index 01353d8..764b192 100644 --- a/src/jalview/gui/AlignFrame.java +++ b/src/jalview/gui/AlignFrame.java @@ -28,7 +28,6 @@ import jalview.analysis.CrossRef; import jalview.analysis.Dna; import jalview.analysis.ParseProperties; import jalview.analysis.SequenceIdMatcher; -import jalview.api.AlignExportSettingI; import jalview.api.AlignViewControllerGuiI; import jalview.api.AlignViewControllerI; import jalview.api.AlignViewportI; @@ -1254,7 +1253,7 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener, { 0, alignmentToExport.getWidth() - 1 }; boolean hasHiddenSeqs = hiddenSeqs.getSize() > 0; - AlignExportSettingI settings = new AlignExportSettings(hasHiddenSeqs, + AlignExportSettings settings = new AlignExportSettings(hasHiddenSeqs, viewport.hasHiddenColumns(), exportFomat); settings.isExportAnnotations(); @@ -6079,10 +6078,10 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener, private int[] startEnd; - private AlignExportSettingI settings; + private AlignExportSettings settings; public ExportData(AlignmentI align, String[] ommit, int[] startEnd, - AlignExportSettingI settings) + AlignExportSettings settings) { this.alignment = align; this.omitHidden = ommit; @@ -6120,12 +6119,12 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener, this.startEnd = startEnd; } - public AlignExportSettingI getSettings() + public AlignExportSettings getSettings() { return settings; } - public void setSettings(AlignExportSettingI settings) + public void setSettings(AlignExportSettings settings) { this.settings = settings; }