X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAlignFrame.java;h=ada24212a7cde6f093560fbbd8e838934d3c36a1;hb=65310fba3ddf0942d5f868130bca9e093888ce7a;hp=efe8e639010b869c5773bcd1abffa0e48a040fa5;hpb=7bf593f3593a0392fb01d78644f7bfd75762a87e;p=jalview.git

diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java
index efe8e63..ada2421 100755
--- a/src/jalview/gui/AlignFrame.java
+++ b/src/jalview/gui/AlignFrame.java
@@ -707,6 +707,7 @@ public class AlignFrame
         viewport.alignment.getWidth();
         viewport.updateConservation();
         viewport.updateConsensus();
+        resetAllColourSchemes();
         alignPanel.repaint();
       }
     }
@@ -800,6 +801,7 @@ public class AlignFrame
 
     viewport.updateConservation();
     viewport.updateConsensus();
+    resetAllColourSchemes();
     alignPanel.repaint();
   }
 
@@ -909,6 +911,7 @@ public class AlignFrame
         }
       }
 
+      resetAllColourSchemes();
       alignPanel.repaint();
     }
   }
@@ -947,6 +950,7 @@ public class AlignFrame
         }
       }
 
+      resetAllColourSchemes();
       alignPanel.repaint();
     }
   }