X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAlignViewport.java;h=8978fd708ba541154064c8e06ac484c8de9e2c7b;hb=90d38cfe94515a5c34f37ecf709b387bcec82073;hp=a1e184f860a132f6ae10255915f06c0f37545f58;hpb=51e665af81d15c0624630ffe04a1cd5b486f7319;p=jalview.git

diff --git a/src/jalview/gui/AlignViewport.java b/src/jalview/gui/AlignViewport.java
index a1e184f..8978fd7 100644
--- a/src/jalview/gui/AlignViewport.java
+++ b/src/jalview/gui/AlignViewport.java
@@ -35,32 +35,34 @@
  */
 package jalview.gui;
 
-import java.util.*;
-
-import java.awt.*;
-
-import jalview.analysis.*;
-import jalview.api.AlignCalcManagerI;
+import jalview.analysis.NJTree;
 import jalview.api.AlignViewportI;
-import jalview.api.AlignmentViewPanel;
-import jalview.api.OOMHandlerI;
-
-import jalview.bin.*;
-
-import jalview.datamodel.*;
-
-import jalview.schemes.*;
+import jalview.bin.Cache;
+import jalview.datamodel.AlignmentAnnotation;
+import jalview.datamodel.AlignmentI;
+import jalview.datamodel.Annotation;
+import jalview.datamodel.ColumnSelection;
+import jalview.datamodel.PDBEntry;
+import jalview.datamodel.Sequence;
+import jalview.datamodel.SequenceGroup;
+import jalview.datamodel.SequenceI;
+import jalview.schemes.ColourSchemeProperty;
+import jalview.schemes.UserColourScheme;
 import jalview.structure.SelectionSource;
 import jalview.structure.StructureSelectionManager;
 import jalview.structure.VamsasSource;
 import jalview.viewmodel.AlignmentViewport;
-import jalview.workers.AlignCalcManager;
-import jalview.workers.ConsensusThread;
-import jalview.workers.ConservationThread;
-import jalview.workers.StrucConsensusThread;
-import jalview.ws.jws2.dm.AAConsSettings;
 import jalview.ws.params.AutoCalcSetting;
 
+import java.awt.Color;
+import java.awt.Container;
+import java.awt.Font;
+import java.awt.Rectangle;
+import java.util.ArrayList;
+import java.util.Hashtable;
+import java.util.Stack;
+import java.util.Vector;
+
 /**
  * DOCUMENT ME!
  * 
@@ -1303,6 +1305,10 @@ public class AlignViewport extends AlignmentViewport implements SelectionSource,
     calcIdParams.put(calcId, settings);
     // TODO: create a restart list to trigger any calculations that need to be restarted after load
     // calculator.getRegisteredWorkersOfClass(settings.getWorkerClass())
+    if (needsUpdate)
+    {
+      Cache.log.debug("trigger update for "+calcId);
+    }
   }
   
 }